Setaria viridis (green foxtail): 117840142
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Entry
117840142 CDS
T07951
Name
(RefSeq) YTH domain-containing protein ECT4 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117840142
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117840142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
117840142
NCBI-ProteinID:
XP_034576492
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Position
9:complement(5557390..5561561)
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AA seq
656 aa
AA seq
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MATVAPAPTVADQATNLLQKLSLESNNDGSNAAKKPSGLPYGSANSGDAQSPASQVDRSI
TPLLQEAMDPNFFYQPSGYASPAYYYPSGYDGSANEWDSRYVGHEGMEMPPQSVYGDMYH
GYGYAPYGPYPSGSPAPNAGHDGQSYGSQQYQYPTQYYQSPTPTNATHGVNGASSQPEMP
SVVSHPTRILVDATKTSANGSATGMPTANNSSLPRKQTNLANNGSYGRGHMQGGGPSASN
YGHSGLRSPAQWYDGPVYSNGHQRPTASSTSYRSSSSSVKSQSQRPTANLMGIHTQMPSS
GMGLTSPSYPSRMYPDNRLFGQYGQYGNTLKGGLGFGSNVYNSRNNGRWGVMDTKYKPRG
RAPFGFGGENQDGFTELNRGPRSGGFKHQKQFGPTVTIAVKGQALPSVGKQSSALTDKGQ
FNQEGFPVAYKDAKFFVIKSYSEDDVHKSIKYNVWASTPNGNKKLDAGYREAQEKSSDCP
VFLFFSVNTSGQFVGVAEMVGPVDFDKTVEYWQQDKWNGCFPLKWHIVKDVPNNILKHIT
LDNNDNKPVTNSRDTQEVKLEQGLEMLKIFKEHVSKTSILDDFGFYENRQKLMQEKRAKQ
QSLQGQGGDVSQEKDKDATDGNLGAQKHALSKEGTLAEEASNASKPVAESGVSNGN
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgttgctcctgccccgaccgttgctgaccaggccaccaatctcctgcagaag
ctgtctctggagagcaataatgatggctccaacgctgccaaaaagccttctgggttgcca
tatggatctgccaactctggagatgcacagagccctgcttcgcaggtggacaggtcgata
acacctctgctgcaagaggccatggaccctaacttcttctaccagcccagtggatatgcc
tctccagcatattactatcctagtggttatgatggctcagccaatgagtgggactcaagg
tatgttggtcatgaaggaatggagatgccccctcagagtgtgtacggcgacatgtaccat
ggatatggttatgctccgtatggcccatatccttcgggttctcctgcaccaaatgctggg
catgatggccaatcatatggctctcagcaatatcagtacccgactcagtattatcagtca
ccaaccccaacgaacgcaacacacggtgtaaatggtgccagttctcaacctgagatgcct
tctgttgtcagtcacccgacacgtattttggtagatgcaacaaaaacaagcgcaaatggg
agtgctactggtatgccgactgctaacaacagttcgctgccgcgtaagcagaccaaccta
gcaaacaatggttcatatggaagaggacatatgcaaggtggcggaccttctgcaagcaat
tatggtcacagtggtcttcgttctccagctcaatggtatgatgggccagtttactcgaat
gggcatcagagaccaactgctagttccacatcttaccgttccagttcatcttctgtgaaa
agtcagagccagcgtccaacagcaaacctcatgggtatacatacacagatgccttcgtct
gggatgggtttgacctcacctagctatccttctaggatgtaccccgacaacagattattt
ggacagtacggtcagtacgggaacacactgaaaggtggccttggttttggatcaaatgtg
tataactcaagaaacaacgggcggtggggagtcatggataccaaatacaagcctagaggg
cgtgcaccttttggttttgggggtgagaatcaagatggctttactgagctgaacagagga
ccaaggtctggtggtttcaagcaccaaaagcagttcgggcctactgtcactattgctgtg
aagggccaggctctcccttcagtgggtaaacagagcagtgctcttacagacaaaggccaa
tttaaccaggaaggatttcctgtagcctacaaggatgcaaaattctttgttatcaaatca
tatagtgaagatgatgtgcacaagagtataaaatacaacgtgtgggctagcactcctaat
ggcaataagaagctggatgctggataccgagaggctcaggagaaatccagtgactgccca
gtgttcttgtttttctctgtgaacactagtggtcagtttgttggtgttgctgaaatggtt
ggtcctgttgactttgataagactgtggagtattggcaacaagacaaatggaatggttgt
ttcccactcaagtggcacatagtcaaggatgtgcccaacaacatcttgaagcatattact
ctggataacaatgataacaagcctgttacaaacagccgtgacacacaagaggttaagctt
gagcaaggtcttgaaatgttgaagattttcaaagaacatgttagcaaaacctcaattttg
gatgattttggtttttacgagaatcgccaaaagttgatgcaggaaaagagagcaaagcag
caatcgcttcaaggccaggggggtgatgtatctcaagagaaggacaaggatgcaactgat
ggcaatctaggggcacagaaacatgcattgagcaaggaaggcactcttgctgaggaagcg
tcaaatgcctccaaacctgtcgctgaaagtggcgtatcaaatggaaactaa
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