Setaria viridis (green foxtail): 117840203
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Entry
117840203 CDS
T07951
Name
(RefSeq) ABC transporter G family member 50
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117840203
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117840203
Transporters [BR:
svs02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
117840203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
RsgA_GTPase
SMC_N
AAA_29
AAA_25
AAA_16
AAA_18
AAA_22
ABC2_membrane_3
AAA_33
AAA_28
AAA_23
AAA
Rad17
ABC_trans_N
AAA_30
AAA_17
MMR_HSR1
AAA_5
NACHT
nSTAND3
RNA_helicase
Viral_helicase1
NTPase_1
RuvB_N
AAA_15
NPHP3_N
ABC_ATPase
Ploopntkinase3
AAA_7
Motif
Other DBs
NCBI-GeneID:
117840203
NCBI-ProteinID:
XP_034576553
LinkDB
All DBs
Position
9:12961278..12971771
Genome browser
AA seq
1405 aa
AA seq
DB search
MESPGRDTSPPSQHPNSALAANQHGPKEMEMEMEMAAAEYRNGAPDAEEMCEDMLLDSSK
LGAIRRREFFNNLLKSVEDDNLHFLQRQKERIERVGVKLPAIEVTYENLCVEAESRYSGG
GHLPTLWNSMKGFFSGLTMFCGLKSDKVKINILQDVSGIIKPSRLTLLLGPPGCGKSTLL
QALAGRLDKSLKVTGDISYNGYRLDEFVPEKTAVYISQYDLHIPDITVRETLDFSAQCQG
VGSRAEILKEVNKRERMAEITPDRDINLFMKATAVAASEKSLQTDYILKIMGLDICADTM
VGDAMRRGISGGQKKRLTTAEMIVGPAKAFFMDEISNGLDSSTTFRIIKCFQQLANVNEC
TMLISLLQPTPEVFDLFDDLILMAEGKIIYHGPRNEAHNFFEDCGFRCPKRKGMADFLQE
VLSRKDQRRYWSGTDESYRYISSHQLSSMYRKYQKQRILEEPSVPQKSKFGKESLSFNKY
SLPKLELFKACGAREALLIKRSMFVYAFKTMQLSTIAAMTMSVFFRSHMTTDLTHAHYYM
GALYYSIFIIMLNGIPEMTMQIARLPSFYKQKSYHFYPSWAYVIPASILKVPISLLNSLV
WICITYYGIGYTPTASRFFCQFLIFSLLHQSVTSLYRFIASYAQTHILCFFYSFVSLSVF
LVFGGFILPKPSMPGWLSWGFWISPLTYAEVGTAINEFLAPRWQKETIQNKTIGNQILIN
HGLYYSWYFYWISVGALLGFIILFYIAFGLALAYRRPVETYHGSMPRKFFPKEQEEEIDI
QKESDGHANMTQEAKMAMPTMQLALTFHNLNYYVDTPPEMLKQGYSARRIQLLNNVTGAF
RPGVLSALMGVSGAGKTTLLDVLAGRKTGGYIEGDIRIGGHTKVQETFVRILGYCEQVDI
HSPELTVEESVAYSAWLRLPSQVDEKTRSEFVDEVLKIVELDDIKDALVGRPGINGLSLE
QRKRLTVAVELVSNPSVILMDEPTTGLDARSAAIVIRAVKNISETGRTVVCTIHQPSTEI
FEAFDELILMKNGGNVIYSGPIGEQSCKVIEYFEKISGVPKIEKNCNPATWMMDITSASM
EFQLNINFASAYQESPLHRDMQEIVEQLSNPLPNSENLCFSYRFPQSRWGQFKACLWKQI
ITYWRSPQYNLNRIVMTVMIALIFGVLYWRHAKILNNEQDLFNVLGAMYMGVILLGVYNN
QSIISFSTTERIVMYREKFAGMYSSWAYSFAQAAIEIPYVFIQVLLYTCIIYPTIGYYWT
AYKLLWFFYTTFCSVLSYVYVGLLLVSITPNVQVATILGSFFNTMQTLFSGFILPAPQFP
KWWLWLYYLSPTSWILNSLLTSQYGNIDKEVKAFGETKTVAVFLNDYFGFHQDRLSIVAV
VITAFPIVLITLYSLSVEKLNFQKR
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcctggaagagatacgagtccaccctcccagcatcctaattcagctttggct
gctaatcaacacggccccaaggagatggagatggagatggaaatggcagcagcggaatac
aggaatggagctccagatgccgaagaaatgtgcgaggacatgttgctcgatagcagcaag
ctgggcgctatcaggaggcgagagttcttcaacaatcttctcaagagcgtcgaggatgac
aacctccatttcctgcagcggcaaaaggaaagaattgagagagttggtgtgaagttgcca
gcaatagaggtgacctatgaaaatctgtgtgtggaagcagaaagcagatactccggtggg
ggtcacctgccaaccctgtggaacagcatgaagggctttttttcgggcctcaccatgttt
tgcgggttaaagtcagataaagtaaagataaatattctacaagatgtgagtggaatcata
aaacccagcagattgactcttctattgggacctccaggatgtggaaaaagcacactgttg
caagctcttgctggtcgacttgataaatctcttaaggttacaggtgatatttcttacaat
ggttaccgacttgatgaatttgtacctgagaaaacagctgtttatattagccaatatgat
ttgcacatacctgatataacagtaagggaaactttagacttctctgcccagtgccaaggt
gttggaagtagagctgaaatactcaaggaagtgaacaaaagggagaggatggctgagata
acacccgatcgtgacatcaatctattcatgaaggcaaccgcagttgcagcttcagagaaa
agcctacagacagactacattttgaagatcatggggctagacatatgtgctgacaccatg
gttggggatgcaatgagaagaggaatatcagggggtcagaagaaaagactaacaacagcg
gagatgatcgttggaccagcaaaagcttttttcatggatgaaatatccaatggtttggat
agctctactactttccgaataatcaagtgctttcagcaattggcaaacgtcaacgaatgc
accatgcttatttcacttcttcaaccaacacctgaggtatttgatctatttgatgaccta
atcctaatggcagaaggaaagattatctatcatggccctcgaaacgaagctcacaatttt
tttgaggactgtggcttcagatgcccgaagagaaaagggatggcagactttctccaagag
gtattatccagaaaggatcaacgacggtactggtctggtacggatgaatcttacagatac
atttcttctcatcaattatcaagcatgtatagaaaatatcagaaacagagaatattagaa
gagccctctgtacctcagaaaagtaagtttggcaaagaatctttatcattcaataagtat
tcactaccaaaactggaactgttcaaagcgtgtggagcaagggaagcactcttgatcaaa
aggagtatgtttgtttatgccttcaaaactatgcagctctccactattgcagccatgaca
atgtctgtattcttccgaagtcatatgacaacagatttaactcatgctcattactacatg
ggagcattatattattccatcttcatcattatgctaaatggcattccagagatgaccatg
caaattgcaaggctgccaagtttctacaagcaaaaaagctatcatttttatccttcatgg
gcatatgtcatacctgcatcaatcctgaaggtccctatctccttattaaactcacttgta
tggatatgcatcacttattatggtattggttacacacctacagcttccaggttcttctgc
caatttctgatattttctcttctccatcaatcagtaacgtcactgtaccgatttattgct
tcttatgctcaaacacatattttgtgtttcttctactcatttgtttccctatcagtcttc
ctagtgtttggaggcttcattcttcccaaaccctctatgccaggatggttaagctgggga
ttttggatatctccattgacctatgcagaagttggcacagccataaatgaattccttgca
ccaagatggcaaaaggaaactatacaaaataaaacaatagggaaccaaatcttgattaat
catggcctctactacagttggtatttttattggatatctgttggagcccttcttggattc
atcattttgttttacatagcttttggactagcactagcttatagaaggcctgtagaaaca
tatcatggaagcatgcctaggaagttctttcctaaagaacaggaagaagagatcgatatc
cagaaagaatctgatggtcatgcaaacatgacccaagaagcaaagatggctatgcctact
atgcaacttgcacttacgttccacaatctaaactactatgttgacacaccaccggaaatg
ctaaaacaaggctactcagctagaagaattcaactattaaacaatgtcactggtgcattc
cgtcctggtgttctttctgcattaatgggtgtaagtggagctgggaagacaactctacta
gatgtattagcaggaaggaaaaccggaggatatattgaaggagacataagaataggtgga
cataccaaggtgcaagaaacatttgtcagaatcttaggttattgtgagcaagttgacata
cattctccagagcttacagttgaagagtctgtagcttattcagcttggcttcgcctgcct
tcacaggttgatgaaaaaacaagatctgaatttgtggatgaagtcctcaaaattgttgag
ttagatgacataaaagatgctttagtcgggaggccaggaataaatggattatccttggag
cagaggaaaaggttaacagttgcagttgaacttgtttcaaacccatcagtcatactaatg
gatgaaccaactacaggattagatgctagatcagctgcaattgttatacgtgcagtgaaa
aatatttccgaaacaggaaggacagttgtatgtacaatccatcagcctagcactgaaatt
tttgaggcatttgacgagcttatattaatgaaaaacggaggaaatgtaatctacagtggg
ccaataggagagcaatcttgcaaagtgattgagtactttgagaaaatttccggtgtccca
aaaatagagaaaaattgcaaccctgctacttggatgatggacataacatcggcatccatg
gagtttcaactcaatataaactttgcaagtgcctaccaagaatccccattgcacagggac
atgcaagagattgttgagcaactaagtaatccattaccaaattcagaaaacctatgtttc
tcctatcgtttcccacagagtcgatgggggcaatttaaagcttgcttatggaaacagatt
ataacttactggagaagtcctcaatataatctgaatcgcattgtgatgacagtaatgata
gccttgatcttcggagtattgtactggaggcatgcaaagatattaaacaatgagcaggat
ctatttaatgttcttggtgcaatgtatatgggggttatactactcggtgtttacaataat
cagtcaattatatcattcagtacaacagagcgcattgtaatgtatcgtgagaaatttgca
ggaatgtactcttcctgggcatattcatttgcacaggctgcaatagagatcccatatgtc
tttatccaagtgttactctatacgtgcatcatttacccgacaattggctattattggaca
gcatacaaactcttatggttcttctacaccacattttgctcagttctttcttatgtttac
gttggattgctgcttgtttcaataactccaaatgttcaagtagccaccatattgggatca
tttttcaacacaatgcagacactattctcgggatttattttacctgcacctcaattccca
aagtggtggctctggctctattacctttcccctacatcttggatactcaattccctgttg
acctcccagtacggaaacatagacaaagaagtcaaagcatttggagaaaccaaaactgtt
gctgttttcttgaatgactattttggttttcatcaagacaggttgagcatagtagctgtt
gttatcactgctttccctattgtattgattaccctttactctctgtcagttgaaaaattg
aacttccaaaagaggtaa
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integrated database retrieval system
