Setaria viridis (green foxtail): 117840224
Help
Entry
117840224 CDS
T07951
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00240
Pyrimidine metabolism
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
117840224
Enzymes [BR:
svs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
117840224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
117840224
NCBI-ProteinID:
XP_034576582
LinkDB
All DBs
Position
9:complement(211166..216784)
Genome browser
AA seq
315 aa
AA seq
DB search
MSIAVAPEVAAALARGGAVVALESTIICHGMPYPKNLQTAFEVEAVVRDAGAIPATIAIL
DGVPHVGLSSEQLKRLAISGRQFQKTARRDIAHVVASGGNGATTVSATMFFAHKVGIPIF
VTGGIGGVHRHGEQTMDISSDLTELGKTPVAVISAGVKSILDIPRTLEYLETQGVTVAAY
RTNEFPAFFTEISGCQVPCRVDSPEECAKIIHANSNLHLGSGILIAVPVPTQHAASGNII
ESAIQKALKEAEEKRITGNAITPFMLERVKELTGGSSLEANIALVKNNARLGAEVAVALS
NLQQRERNKIGRSSL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgcggtggcgccggaggtcgcagccgccctcgcgcgcggcggcgctgtagtc
gccctcgagtccaccatcatctgccacggtatgccgtaccccaagaatctccagaccgcc
ttcgaggtggaggccgtcgtcagggacgccggtgctatccctgccaccatagccatccta
gatggagtcccacatgttggccttagcagtgagcaattaaagaggctggccattagtgga
agacaatttcagaagacagctagaagggatattgcgcatgtggttgcatctggtggcaat
ggtgcaacgacagtttctgccactatgttctttgctcacaaggttggcataccaattttt
gtaactgggggaataggaggcgtgcatagacatggcgaacaaactatggacatctcctca
gacttgactgaacttggaaagactcctgtggctgttatatcagcgggcgtgaagtccatt
ttagacatacctaggacacttgaatacctggaaactcaaggagtcactgttgctgcttac
agaaccaatgaatttcctgctttcttcacggagattagtggatgccaggtgccatgtcgt
gttgattctccagaagagtgcgccaaaataatacatgcaaacagtaacctacatctaggt
tctgggatccttattgcagtgccggttcccacgcagcatgcagcttcagggaacattata
gaatctgcaatacagaaagctctaaaggaggcagaagaaaaaaggataacaggaaatgcg
atcactcccttcatgcttgaaagagtaaaagaactaactggaggatcttccttggaagcc
aatatcgcacttgttaagaacaatgctcgtcttggtgcggaagttgctgttgccctttct
aatcttcagcagagagaaagaaacaaaattgggagatcttcactgtag
DBGET
integrated database retrieval system
