Setaria viridis (green foxtail): 117840366
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Entry
117840366 CDS
T07951
Name
(RefSeq) novel plant SNARE 13
KO
K08494
novel plant SNARE
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117840366
Membrane trafficking [BR:
svs04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
117840366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
DUF5089
MCPsignal
Occludin_ELL
GCIP_C
TMPIT
RGS_DHEX
DUF6988
YkyA
Motif
Other DBs
NCBI-GeneID:
117840366
NCBI-ProteinID:
XP_034576766
LinkDB
All DBs
Position
9:43130132..43134532
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AA seq
275 aa
AA seq
DB search
MATDLPMSPELEQIDGEIHDIFRVLQNGFQKMDKIKDSNRQAKQLEDLTGKMKECKRLIK
EFDRVLKDEESNNPPEINKQLNDRKQFMIKELNSYVTLRKTYQSSLGNTNKRVELFDMGA
GSSEPAAEDNIQMASAMTNQQLIDAGRNQMDQTDQAIERSKMVVAQTVETGAQTAATLTQ
QTEQMKRIGNELDSVHFSLKKASQLVKEIGRQVATDKCIMAFLFLIVLGVIAIIVVKIVH
PNNKNIRDIPGLAPPAQNYQIHNRRLLWAEDFIGL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgacttgcccatgagcccggagctcgagcagatcgacggcgagatccacgac
atcttccgcgtgctacaaaatggattccaaaagatggataagattaaagattcaaatagg
caagctaagcaattggaagatcttacagggaaaatgaaggagtgcaagcgcttgatcaaa
gagtttgatcgcgttctcaaagatgaggagtcgaataatccacctgagatcaacaagcag
ctaaatgacagaaaacagttcatgatcaaagagttgaattcctacgtcaccttgaggaaa
acatatcaaagtagccttggtaacaccaataagagggttgagctcttcgatatgggtgct
gggagtagcgagcctgctgctgaggacaatattcaaatggcatcagccatgacaaatcaa
caactcattgatgctggaaggaatcaaatggatcaaacagatcaagctattgaacgttca
aaaatggttgtggcacaaactgttgagactggagctcaaactgctgcaacattaacacag
caaacggagcaaatgaagagaattggcaatgagcttgattcggtccacttttctctgaag
aaagctagccaattagtgaaagagattggtcgccaggttgcaactgacaaatgtattatg
gcattcctctttctgattgttttaggtgtgattgctatcattgttgttaagattgtccat
ccaaacaacaaaaacatccgagacattccaggactggccccgcccgcacaaaattatcaa
atccataacaggagattattgtgggcagaggatttcataggtctgtga
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