KEGG   Setaria viridis (green foxtail): 117840434
Entry
117840434         CDS       T07951                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03020  RNA polymerase
svs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117840434
  09124 Replication and repair
   03420 Nucleotide excision repair
    117840434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:svs03021]
    117840434
   03400 DNA repair and recombination proteins [BR:svs03400]
    117840434
Transcription machinery [BR:svs03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     117840434
  RNA polymerase III system
   RNA polymerase III
     117840434
  RNA polymerase I system
   RNA polymerase I
     117840434
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117840434
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 117840434
NCBI-ProteinID: XP_034576833
LinkDB
Position
9:688377..691478
AA seq 162 aa
MAEHLFDDTFVVKKLDPDGKKFDKVSRVEAMSDDCRTYMQLDVATEVYPMRVDEKFKMVL
AETLNLDGTPDTGYFTQAVGETLADRFEYVMQGKVYKIADYAPPKPKEDADTSNKDADTS
IDPKVEVFASFGGLLMVLRSDPSFAAPFELDKRVFLLIRKGP
NT seq 489 nt   +upstreamnt  +downstreamnt
atggctgagcacctatttgatgacaccttcgtcgtcaagaagctcgatcctgatggtaaa
aagtttgacaaagtttctcgtgtggaagctatgagcgatgattgtcgtacatatatgcag
ttagatgttgccacagaggtttatcctatgcgtgttgacgaaaaatttaaaatggttcta
gctgagactctgaatttggatggcactccagatactggctacttcacacaggctgtcgga
gaaactctcgctgacaggtttgagtatgtcatgcaagggaaggtttacaaaattgcagat
tacgccccgcccaagcccaaagaagatgcagacacctccaacaaagatgcagacacctca
atagatcctaaagtggaggtttttgcatcattcggtggtctcctgatggtgctcaggagt
gacccttcctttgctgcccccttcgagctggacaagagggtttttctacttatacgcaag
gggccgtag

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