KEGG   Setaria viridis (green foxtail): 117840448
Entry
117840448         CDS       T07951                                 
Name
(RefSeq) tubulin alpha-1 chain
  KO
K07374  tubulin alpha
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs04145  Phagosome
svs04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:svs00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117840448
  09142 Cell motility
   04814 Motor proteins
    117840448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svs03019]
    117840448
   03036 Chromosome and associated proteins [BR:svs03036]
    117840448
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:svs04812]
    117840448
   04147 Exosome [BR:svs04147]
    117840448
Messenger RNA biogenesis [BR:svs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117840448
Chromosome and associated proteins [BR:svs03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117840448
Cytoskeleton proteins [BR:svs04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117840448
Exosome [BR:svs04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117840448
  Exosomal proteins of other body fluids (saliva and urine)
   117840448
  Exosomal proteins of colorectal cancer cells
   117840448
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 117840448
NCBI-ProteinID: XP_034576848
LinkDB
Position
9:complement(6665957..6668805)
AA seq 451 aa
MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPGDKTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLIA
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEFDEGEEGDEGDEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagggagtgcatctcgatccacatcggccaggccggtatacaggtcggaaacgcgtgc
tgggagctctactgcctcgagcatggcattcaggctgatggccagatgcccggcgacaag
accgttggaggaggtgatgatgctttcaacaccttcttcagtgagactggtgctgggaag
catgtgccccgtgctgtttttgttgaccttgagcccactgtgattgatgaggtgaggact
ggtacttaccgccagctcttccaccctgagcagctcatcagtggcaaggaggatgctgcc
aataactttgcccgtggtcactacaccattggcaaggagattgttgacctgtgccttgac
cgcatcaggaagcttgccgacaactgcactggtctccagggcttccttgtcttcaatgct
gttggtggaggaacaggctctggtcttggttctctcctccttgagcgtctgtctgttgac
tatggcaagaagtccaagctcgggttcactgtgtacccatctccccaggtctccacctca
gtggttgagccatacaacagtgtcctgtccacccactccctcctcgagcacactgatgtt
gctgttctgcttgacaatgaggccatctatgacatctgccgccgctcccttgacattgag
cgccccacctacaccaacctcaacaggctcgtgtctcaggtcatctcatctctgattgcc
tccctgaggttcgatggtgctctgaacgtggatgtgaacgagttccagaccaacttggtg
ccctacccgaggatccacttcatgctttcatcctatgcaccagtcatctctgccgagaag
gcctaccatgagcagctgtctgttgcagagatcaccaacagcgcctttgagccgtcctcc
atgatggccaagtgcgacccccgccatggcaagtacatggcttgctgcctcatgtaccgt
ggtgatgtggtgcccaaggacgtcaacgctgctgttgccaccatcaagaccaagcgcacc
atccagttcgtggactggtgccccactgggttcaagtgcggcatcaactaccagcccccc
agcgtggtgcctggcggtgacctggccaaggtgcagcgtgccgtgtgcatgatctccaac
tccaccagcgtggtcgaggtgttctcccgcatcgaccacaagtttgacctcatgtacgcc
aagcgtgccttcgttcactggtacgtgggtgagggcatggaggagggcgagttctctgag
gcccgtgaggacctggctgcgctcgagaaggactacgaggaggtcggcgctgagttcgac
gagggcgaggaaggagacgagggtgacgagtactag

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