Setaria viridis (green foxtail): 117840448
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Entry
117840448 CDS
T07951
Name
(RefSeq) tubulin alpha-1 chain
KO
K07374
tubulin alpha
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04145
Phagosome
svs04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117840448
09142 Cell motility
04814 Motor proteins
117840448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117840448
03036 Chromosome and associated proteins [BR:
svs03036
]
117840448
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
svs04812
]
117840448
04147 Exosome [BR:
svs04147
]
117840448
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117840448
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117840448
Cytoskeleton proteins [BR:
svs04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117840448
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117840448
Exosomal proteins of other body fluids (saliva and urine)
117840448
Exosomal proteins of colorectal cancer cells
117840448
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117840448
NCBI-ProteinID:
XP_034576848
LinkDB
All DBs
Position
9:complement(6665957..6668805)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPGDKTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLIA
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEFDEGEEGDEGDEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagggagtgcatctcgatccacatcggccaggccggtatacaggtcggaaacgcgtgc
tgggagctctactgcctcgagcatggcattcaggctgatggccagatgcccggcgacaag
accgttggaggaggtgatgatgctttcaacaccttcttcagtgagactggtgctgggaag
catgtgccccgtgctgtttttgttgaccttgagcccactgtgattgatgaggtgaggact
ggtacttaccgccagctcttccaccctgagcagctcatcagtggcaaggaggatgctgcc
aataactttgcccgtggtcactacaccattggcaaggagattgttgacctgtgccttgac
cgcatcaggaagcttgccgacaactgcactggtctccagggcttccttgtcttcaatgct
gttggtggaggaacaggctctggtcttggttctctcctccttgagcgtctgtctgttgac
tatggcaagaagtccaagctcgggttcactgtgtacccatctccccaggtctccacctca
gtggttgagccatacaacagtgtcctgtccacccactccctcctcgagcacactgatgtt
gctgttctgcttgacaatgaggccatctatgacatctgccgccgctcccttgacattgag
cgccccacctacaccaacctcaacaggctcgtgtctcaggtcatctcatctctgattgcc
tccctgaggttcgatggtgctctgaacgtggatgtgaacgagttccagaccaacttggtg
ccctacccgaggatccacttcatgctttcatcctatgcaccagtcatctctgccgagaag
gcctaccatgagcagctgtctgttgcagagatcaccaacagcgcctttgagccgtcctcc
atgatggccaagtgcgacccccgccatggcaagtacatggcttgctgcctcatgtaccgt
ggtgatgtggtgcccaaggacgtcaacgctgctgttgccaccatcaagaccaagcgcacc
atccagttcgtggactggtgccccactgggttcaagtgcggcatcaactaccagcccccc
agcgtggtgcctggcggtgacctggccaaggtgcagcgtgccgtgtgcatgatctccaac
tccaccagcgtggtcgaggtgttctcccgcatcgaccacaagtttgacctcatgtacgcc
aagcgtgccttcgttcactggtacgtgggtgagggcatggaggagggcgagttctctgag
gcccgtgaggacctggctgcgctcgagaaggactacgaggaggtcggcgctgagttcgac
gagggcgaggaaggagacgagggtgacgagtactag
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