Setaria viridis (green foxtail): 117840520
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Entry
117840520 CDS
T07951
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03015
mRNA surveillance pathway
svs04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117840520
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117840520
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svs01009
]
117840520
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117840520
03036 Chromosome and associated proteins [BR:
svs03036
]
117840520
Protein phosphatases and associated proteins [BR:
svs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117840520
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117840520
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117840520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF4187
P2R3B_EF-hand
Motif
Other DBs
NCBI-GeneID:
117840520
NCBI-ProteinID:
XP_034576924
LinkDB
All DBs
Position
9:complement(16646345..16655336)
Genome browser
AA seq
541 aa
AA seq
DB search
MEVEPARRDAAALDPELLQLPELAPGALRENSIIADALYSQWLVLPETAKLVKSLIEDAK
AGATLNVAGTSASANAASSSSLPSMFPAGSAPPLSPRSTSGSPRVMRRGSGAGPSSLGSP
LKLVSEPVREVIPQFYFKHGRPPPKDLKEQCLSRIDHLFFGGEGLQIQEFRSVTKDICKL
PSFFSSVLFKKIDVACTGTVSRDAFVEYWINDNKITMDMASQIFEILRKPGYNYLTQDDF
KPVLKELLATHPGLEFLQGTPEFQERYAETVIYRVFYSINRSGNGHLTLRELKRGNLIAA
LQQLDEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHSLTYRIVDR
IFTQIPRKFTSMTEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGILTSNEMQF
FYEEQLHRMECMAQEPVLFEDILCQMIDMIGPENESYFTLRDLKRCKLSGNIFNILFNLN
KFMAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDGEDASNGSGDVWDESLEAP
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggagcctgcgaggagggacgcggcggcgctggacccggagctgctgcagctc
ccggagcttgcgccgggcgcgctccgtgagaattccatcatagctgatgcgctctactcg
cagtggctcgtgctacccgagacggccaagctggtaaagtctttgattgaggatgcaaaa
gctggtgctacgcttaatgttgctggaacctctgctagcgcaaatgctgcttcaagtagt
tctctaccatcaatgtttcctgctggtagtgctcctccactttctcctaggagcacttct
ggttctccccgtgttatgagacgaggatctggtgctggaccatcgtccttgggttctcca
ttaaaattagttagtgaaccagtgagagaagttatacctcagttttacttcaagcacggg
cgtcctcctccgaaagacttgaaggagcagtgcttatctagaatagatcacctgtttttt
ggtggggaggggcttcagattcaagaattcagatcggtcacaaaggacatatgcaaactc
ccttcgttcttctccagtgttcttttcaagaaaattgatgttgcgtgcactggaaccgtc
tcaagggatgcatttgttgaatactggatcaatgataataagattacaatggatatggct
agccaaatatttgaaatattaagaaagccaggttacaactatctcactcaggatgacttc
aagcctgtcctaaaagaactcctggcaactcaccctggcttagagttcttacaagggacc
ccagagtttcaggagagatatgcggagactgtaatatacagagtcttttactccatcaat
agatctggaaatggccatctgactctgagagagctcaaacgtggaaatttaattgccgcc
cttcagcaattagatgaggaagaagatatcaacaaagtgttgagatacttctcatatgag
cacttctatgtgatctactgcaaattttgggagctggatacagatcatgatttcttgatt
gataaggaaaaccttatcagatatggaaatcattcattgacctatagaatagttgataga
atttttacacagatcccaaggaaattcacaagcatgacagaaggaaagatgggttatgaa
gactttgtttactttatattatcagaggaagacaaatcatctgagcctagccttgaatac
tggtttaagtgcattgatcttgatggtaatggtattttaacttccaatgaaatgcaattt
ttctatgaggagcaattgcaccgtatggagtgcatggcacaggagcctgtgctttttgag
gacatattatgccagatgattgacatgattggaccagagaatgagagctattttacacta
cgggacttaaaacggtgtaaactctcaggaaatatattcaatattcttttcaatctgaac
aagttcatggcatttgaaactcgtgatccgttcctcattcgccaggaacgtgaaaaccca
actctaactgagtgggatcggttcgcccatagagagtatattaggttgtccatggaagaa
gatggtgaagatgcttcaaatggaagtggggatgtttgggatgaatcacttgaagctcca
ttctga
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