Setaria viridis (green foxtail): 117840661
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Entry
117840661 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117840661
Membrane trafficking [BR:
svs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
117840661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
WD40_CDC20-Fz
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
117840661
NCBI-ProteinID:
XP_034577080
LinkDB
All DBs
Position
1:39333386..39342948
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AA seq
1124 aa
AA seq
DB search
MYLAYGWPQSIPLDPDDSDRVVLLRVLGRLLLAVCPASLHLWSAAQHRVRLARFDRSADS
LAAHGQNAHAVWSPDAKTVAVLTSSFYLHIYRVQLSGKPLIVGGKQLPGLCLASISQIIT
EKVPLANGVAITSNFVCDSKSMLLGLSNGHVQVVSWNAEFSDSFKLGCSVCSSEKPTAVI
DALVFDPPSLRENSDARPAPCCTGNSSIVHVELSVKLRLLVALYSGCHIALCTVGKKGLK
QPGSIRVERWLNTDDAMCTSVASEQQILAVGCSRGVVELYDLAENTRHIRTISLYDWGYS
VEDTGPVACISWTPDNCAFAVGWKFRGLTVWSVSGCRLMCTIRQTGSNSASSPMVKPSAL
KFEPLMGGTSHIQWDDNGYKLFAVEESLSERVLAFSFAKCCLNRGLSGTTYSHQVLYGDD
RILLVQPDDADELKLLHLNVPVSYISQNWPVLHVVASNDGMYLAVAGSHGLVLYDLRNKR
WRFFGDVTQEQKIQCKGLLWLGKIVIVCNYVESSNTYELLFFPRYHLDYSSLLYRKPLLG
RPIAMDVFQNYILVTYSPFDVHIFHVVISGELSPASNPVLQLSTVRELSIMSPKSPPVSM
RFIPDQNDKGALKQNASGSSDLLSEQPSRCLILRTNGELSVLDMDDGHEHALTNSVELFW
VTCSQFEEKGSLIKEVSWLDYGHRGMQVWYPSHGADPFKQEDFLQLDPELEFDREVYPLG
LLPNVGVVVGVSQRMSFSTAEFPCFEPSPQAQTILHCLLRHLLQRDKIEEALRLANLSAE
KPHFSHCLEWLLFTVFDADISRPSASKNQVLQKVNSPKKSLLEKTCDLLRNFPEYMDVVV
SVARKTDGRHWADLFSAAGRSTEMFEECFQRRWYRTAACYILVIAKLEGPAVSQYCALRL
LQATLDESLYELAGELVRFLLRSGRDFENATSDSEKLSPRFLGYFLFRSPYKRQSSDLKS
NSMKELSPHIASVMNILESHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERLGSARLEN
FASALELIGQKLQMDTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRAEVLVDLFRHDL
RLWKAYSITLQSHDVFREYLDLLNMLEEQLSSVSGLTLQNGPLS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtacctggcgtacgggtggccgcagtcgatccctctggacccggacgactcggaccgc
gtggtcctcctccgcgtccttggccgcctcctcctcgccgtttgccccgcctcgctccac
ctctggtccgccgcccaacaccgggtccgcctcgcccgcttcgaccgctccgcggactcc
ctcgccgcccacggccagaacgcgcacgccgtgtggagccctgacgccaagaccgtcgcc
gtcctgacctcctccttctacctccacatatacagggttcagctctcagggaagccactg
atcgtcggtggcaagcagctcccggggctttgcctggccagtatatcccaaatcatcacc
gagaaggttcctctcgccaatggcgttgccataacgagcaatttcgtatgtgatagcaaa
agcatgctcctcggattatccaatgggcatgtgcaggtcgtgtcctggaatgctgagttc
tcagatagcttcaagcttggttgctctgtgtgttcatctgagaaacctactgctgtcata
gatgcgttggtgtttgatcctcccagtttgcgagaaaactctgatgcaaggcctgctcct
tgctgcacaggcaattcttctattgtccatgttgagctgtcggtgaagctaaggttgctt
gttgctttgtactcaggctgtcacattgccctctgtactgttggtaagaagggattaaag
cagcctggcagcatcagagtggagagatggttgaacactgatgatgcaatgtgtacttct
gtggcttctgagcaacagattcttgctgtaggatgcagcagaggtgttgttgaattgtat
gatctagctgagaacacacgtcatatacgaacaatttcgttatatgattgggggtattca
gtggaagatactggtcctgttgcctgtatatcttggacgcctgacaattgcgcttttgca
gttgggtggaaatttagaggacttactgtatggtctgtgtctggatgccgattgatgtgt
actattcgtcaaactggatcaaattctgcctcatctccaatggtgaaacctagtgctcta
aaatttgagcctctaatgggagggacatcacacatacaatgggatgataatggatacaag
ttatttgctgttgaggaaagcttgtcagaaagggttcttgctttctcatttgccaaatgt
tgcctaaacagaggactttcaggcacaacatattcccaccaggttctttatggagatgat
cgaatcctgttggtgcaaccggatgatgctgatgaactgaagttattacaccttaatgtt
ccagtttcctacatttcccagaactggccagttctacatgtagtggcgagcaacgatggt
atgtacttagcagttgctggttctcatgggctagtgctgtatgatctgcgaaataaaagg
tggcgtttttttggtgatgttacacaagagcaaaagatccaatgcaaaggcctattgtgg
ctgggaaagattgttattgtatgcaactatgttgaatcatcaaatacgtatgagcttctc
tttttcccaagatatcatcttgattatagctccttactctaccggaaaccacttcttgga
aggccaattgccatggatgttttccagaattacatattagttacctacagtccatttgat
gtgcatatcttccatgtggtgatatcgggagaactgtcacctgctagcaatccggtttta
cagctttcaacagtacgagaactttcaatcatgagtccaaagagcccccctgtttcaatg
cgcttcattcctgatcaaaatgacaaaggagcgctgaaacaaaatgctagtggatcttct
gatcttttatccgagcaaccatcaagatgtttgatcttgcggaccaatggtgaactttct
gtgctggacatggatgatggacacgaacatgcactcacaaattcagttgaactcttttgg
gtcacctgttcacaattcgaagagaagggtagccttattaaagaggtttcatggcttgac
tatggtcatcggggtatgcaggtatggtatccatcacatggagcagatccttttaagcaa
gaagatttcttgcagttggatcctgagcttgaatttgatcgtgaggtgtatcctcttggt
cttcttccaaatgttggtgtggtcgttggtgtttctcagagaatgtccttctcaactgct
gagtttccatgctttgagccttcacctcaagcccaaacaatattgcattgtttattacga
catctacttcagagggacaagattgaagaagctttgcgcttggcgaatttgtcagcagaa
aaacctcacttttcacactgtttagagtggcttctgtttacggtattcgatgcagatata
tcaaggccaagtgcttcaaagaaccaggttttacaaaaagtaaattctccaaagaagtct
cttcttgagaagacatgcgacctattgcggaattttcctgaatatatggatgttgtagtc
agtgttgctaggaaaacagatggtcgacactgggctgatcttttctctgcagccggacga
tccacggagatgtttgaggaatgcttccaacggagatggtacaggactgctgcttgctac
atactggtcattgctaagctggagggccctgcagtcagtcagtactgtgcacttcgtttg
ctacaagctacacttgatgaatctttgtatgagcttgctggggagttggttcgcttcttg
ctaagatctggaagagactttgaaaatgcaacctcagactccgagaagctctctccaaga
tttcttggctactttctattccgttcaccatataagcggcaatcttctgatttgaaaagt
aactcaatgaaagaacttagtccacatattgcctctgttatgaacattctagagagccat
gctagctatttgatgtctggcaaggagctttctaaactcgtcgcttttgtcaaagggaca
caatttgatcttgtggaatatcttcaacgagaaagattagggtctgctcggctggagaat
tttgcatctgcacttgaactgattggacaaaagctccaaatggacacactccaaagccgg
cttgatgctgagttccttctagctcatatgtgttcagtcaaatttaaggaatggatcgtg
gtgctggctactttattgcgacgtgcagaggttttggtggatctctttcggcatgatttg
cgattgtggaaagcatatagcattactctacagtcacatgatgtattcagagaatatctt
gatcttcttaatatgttggaggagcagctttcgtccgtatctggtcttacattgcaaaat
ggaccattgtcatga
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