Setaria viridis (green foxtail): 117840741
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Entry
117840741 CDS
T07951
Name
(RefSeq) transcription factor-like protein DPB
KO
K04683
transcription factor Dp-1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117840741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117840741
03036 Chromosome and associated proteins [BR:
svs03036
]
117840741
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
117840741
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
117840741
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
117840741
NCBI-ProteinID:
XP_034577154
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Position
9:18754086..18760090
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AA seq
340 aa
AA seq
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MVSGAGPSSGPAHSASTGAGGGSPSDKGGAAPSVSASVSTPASESTVARRLNGLDLQADD
APSSQPATSKKKKRGARAVGPDKNGRGLRQFSMRVCEKVESKGRTTYNEVADELVAEFSD
PNINIDSPDPDNPSAQQYDEKNIRRRVYDALNVLMAMEIISKDKKEIQWRGLPKTSMNDI
EELKTEIVGLKGRIDKKSAYLQDLQDQYVSLQNLVQRNEQLYGSGDAPSGGVALPFILVQ
TRPHATVEVEISEDMQLVHFDFNSTPFELQDDSFVLKAMGLSGKEETDGTQAPVANGGEC
SSTPNNYWHQSPQPTRPRGVRLPNSPPIPGILKGRVKHEH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggtctctggcgccgggccctccagcgggccggcccactccgcgtccaccggcgccggg
ggcggctccccctctgacaagggcggcgccgcgccttcggtctctgcctcggtctccacg
cctgccagcgagagcaccgtggcccgccgcctcaacggactcgacctacaggccgacgac
gcgccatcgtcgcagccagccacgagcaagaagaaaaagagaggggcacgcgccgttggt
cctgacaaaaatggccgtggattgcgccaattcagcatgagagtctgtgagaaagttgaa
agcaaagggagaacaacctacaatgaggtggctgatgaactggttgctgagttttcagac
cccaacattaatattgactctccagatcctgataatccctctgcacaacaatacgatgaa
aaaaatattcgacgaagagtttatgatgcgctgaatgtcctaatggcaatggagattata
tctaaagataaaaaggaaatacaatggagaggcttgcccaagacaagtatgaatgatatt
gaagaattgaagacagagatcgttggactgaaaggtcggattgacaagaaaagtgcatat
ttgcaggacttacaagatcaatatgtaagtctccaaaacttggtacaacgaaatgagcag
ctctatgggtcaggagatgcaccttctggtggagtggccttgccatttatactagttcag
acacgtcctcatgcaaccgtagaagtggagatatcagaagatatgcagctggtgcatttt
gacttcaatagcactccatttgagttgcaggatgattcctttgtactgaaagctatgggg
ttatctggcaaagaagaaactgatggcacccaagcccctgttgccaatggaggtgagtgc
tcaagtacaccgaacaattattggcatcaatcgccgcagcctacgaggccaagaggagta
aggctaccaaactcgcctcctattccagggatactaaaagggcgtgtcaagcatgaacac
tag
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