Setaria viridis (green foxtail): 117840852
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Entry
117840852 CDS
T07951
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00040
Pentose and glucuronate interconversions
svs01100
Metabolic pathways
Module
svs_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117840852
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
117840852
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
117840852
NCBI-ProteinID:
XP_034577280
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Position
9:8899696..8900958
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AA seq
420 aa
AA seq
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MAFTTKNAMRALFLLALVFTAQAGKAAPAASKDAKAADDSAAKGGGSCPSGSCDITKLGA
SGNGKTDSTKALEEAWASACGGTGKNTIMIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLA
STDLSLYKGNWIEILRVDNLVITGKGKLDGQGSAVWSKNACAKKYDCKILPNSLVLDYVN
NGEVSGITLLNSKFFHMNVFQCKDLVIKDVTVTAPGDSPNTDGIHMGDSTGISIVNTVIG
VGDDCISIGPGSTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDITVKDCTLKKSSNGLR
IKAYEDAASVLTASKIHYENIKMEDAGNPIIIDMKYCPNKICTSSGASKVTVKDVSFKNI
TGTSSTPEAVSLLCSDKIPCSGVTMDNVKVEYSGTNNKTMAVCKNAKVTTTASLKELACA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaccaccaaaaacgccatgagagccctcttcctccttgcgctagtgttcacc
gcgcaagccggaaaggcggcgccggcggcgtcgaaggacgctaaggcggcggacgatagc
gcggcgaagggaggagggtcgtgtcccagcgggtcgtgcgacatcaccaagctgggcgcg
tccggtaatggcaagacggacagcaccaaggcgctagaggaggcatgggcgtcggcatgc
ggcggcaccgggaagaacacgatcatgatccccaagggcgactacctggttggcccgctc
aacttcacgggcccgtgcaagggtgatgtgaccatccaggtggacggcaacctgctggcg
tccacggacctgagcctgtacaagggcaactggatcgagatcctgcgcgtggacaacctg
gtgatcaccggcaagggcaaacttgacgggcagggctccgccgtgtggagcaagaatgcc
tgtgccaagaagtacgactgtaagatcctgcccaactcgttggtgctggactacgtgaac
aacggcgaggtgtccggcatcacgctgctcaactccaagttcttccacatgaacgtgttc
cagtgcaaggacctggtgatcaaggacgtgacggtgacagcgccgggtgacagccccaac
acggacggcatccacatgggcgactcgaccgggatcagcatcgttaacacggtcatcggc
gtcggcgacgactgcatctccatcggcccggggagcaccaaggtcaacatcaccggcgtc
acctgcggcccggggcacggcatcagcatcggcagcctggggcggtacaaggacgagaag
gacgtgacagacatcaccgtcaaggactgcacgctcaagaagtccagcaacggcctccgg
atcaaggcgtacgaggacgccgcgtccgtgctcactgcctccaagatccactacgagaac
atcaagatggaggatgctgggaaccccatcatcatcgacatgaagtattgccccaacaag
atctgcaccagcagcggcgcctccaaggtcaccgtcaaggacgtctccttcaagaacatc
accggcacctcctccacccccgaggccgtcagcctgctctgctccgacaagatcccctgc
agcggcgtcaccatggacaacgtcaaggtcgagtacagcggcaccaacaacaagaccatg
gctgtctgcaagaacgccaaggtcaccaccaccgcatccctcaaggagctcgcatgcgca
tga
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