KEGG   Setaria viridis (green foxtail): 117840852
Entry
117840852         CDS       T07951                                 
Name
(RefSeq) exopolygalacturonase
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs00040  Pentose and glucuronate interconversions
svs01100  Metabolic pathways
Module
svs_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:svs00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    117840852
Enzymes [BR:svs01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     117840852
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim
Other DBs
NCBI-GeneID: 117840852
NCBI-ProteinID: XP_034577280
LinkDB
Position
9:8899696..8900958
AA seq 420 aa
MAFTTKNAMRALFLLALVFTAQAGKAAPAASKDAKAADDSAAKGGGSCPSGSCDITKLGA
SGNGKTDSTKALEEAWASACGGTGKNTIMIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLA
STDLSLYKGNWIEILRVDNLVITGKGKLDGQGSAVWSKNACAKKYDCKILPNSLVLDYVN
NGEVSGITLLNSKFFHMNVFQCKDLVIKDVTVTAPGDSPNTDGIHMGDSTGISIVNTVIG
VGDDCISIGPGSTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDITVKDCTLKKSSNGLR
IKAYEDAASVLTASKIHYENIKMEDAGNPIIIDMKYCPNKICTSSGASKVTVKDVSFKNI
TGTSSTPEAVSLLCSDKIPCSGVTMDNVKVEYSGTNNKTMAVCKNAKVTTTASLKELACA
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggccttcaccaccaaaaacgccatgagagccctcttcctccttgcgctagtgttcacc
gcgcaagccggaaaggcggcgccggcggcgtcgaaggacgctaaggcggcggacgatagc
gcggcgaagggaggagggtcgtgtcccagcgggtcgtgcgacatcaccaagctgggcgcg
tccggtaatggcaagacggacagcaccaaggcgctagaggaggcatgggcgtcggcatgc
ggcggcaccgggaagaacacgatcatgatccccaagggcgactacctggttggcccgctc
aacttcacgggcccgtgcaagggtgatgtgaccatccaggtggacggcaacctgctggcg
tccacggacctgagcctgtacaagggcaactggatcgagatcctgcgcgtggacaacctg
gtgatcaccggcaagggcaaacttgacgggcagggctccgccgtgtggagcaagaatgcc
tgtgccaagaagtacgactgtaagatcctgcccaactcgttggtgctggactacgtgaac
aacggcgaggtgtccggcatcacgctgctcaactccaagttcttccacatgaacgtgttc
cagtgcaaggacctggtgatcaaggacgtgacggtgacagcgccgggtgacagccccaac
acggacggcatccacatgggcgactcgaccgggatcagcatcgttaacacggtcatcggc
gtcggcgacgactgcatctccatcggcccggggagcaccaaggtcaacatcaccggcgtc
acctgcggcccggggcacggcatcagcatcggcagcctggggcggtacaaggacgagaag
gacgtgacagacatcaccgtcaaggactgcacgctcaagaagtccagcaacggcctccgg
atcaaggcgtacgaggacgccgcgtccgtgctcactgcctccaagatccactacgagaac
atcaagatggaggatgctgggaaccccatcatcatcgacatgaagtattgccccaacaag
atctgcaccagcagcggcgcctccaaggtcaccgtcaaggacgtctccttcaagaacatc
accggcacctcctccacccccgaggccgtcagcctgctctgctccgacaagatcccctgc
agcggcgtcaccatggacaacgtcaaggtcgagtacagcggcaccaacaacaagaccatg
gctgtctgcaagaacgccaaggtcaccaccaccgcatccctcaaggagctcgcatgcgca
tga

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