Setaria viridis (green foxtail): 117840859
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Entry
117840859 CDS
T07951
Name
(RefSeq) amino acid transporter AVT1A
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117840859
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117840859
Transporters [BR:
svs02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
117840859
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Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
117840859
NCBI-ProteinID:
XP_034577288
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Position
1:complement(39479563..39484287)
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AA seq
550 aa
AA seq
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MAAEQEKKQEKKEAEEEELVLEDGGIESPRRSFEDGDDYEEGSDGGDDDDDDDGERDGDG
VGSPRSFQSRPWPQSYRETTDTYTIAASPSFGYLGPSTSKYSLLDLGRSGLGSDLKLPLV
SDNADGKQDFVKTLPKTLGSIRDERVSFHLQHTGEVYISQGCNVTQTVFNGINVLAGVGL
LSTPFTIHEAGWTGLAVLVCFATVCCYTGILLKHCFESKDGISSYPDIGEAAFGRIGRLF
ISIILYTELYSYCVEFIILEGDNLTSIFPKASFDWLGFHVDGKHFFGVLTAILVLPTVWL
RDLRVLSYLSAGGVIATLLVFVSVGLVSVTDNIGFHSTGKVVNWTGMPFAIGVYGFCYSG
HSVFPNIYQSMSDRSKFPKALFICFAICTAIYGSFAIIGFLMFGENTLSQITLNLPEHSV
ASKVALWTTVINPFTKYALLLNPIARGLEELRPEGFMNETSCSIILRTALVASTVCIAFL
MPFFGLVMALIGSLLSILVAVIMPALCFLKIVQNKATRSQVIASVGIIILGIISAIVGTY
SSIERIAENY
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcaggagaagaagcaggagaagaaggaggcggaggaggaggagctggtg
ctggaggacggcggcatcgagagcccgcgccgcagcttcgaggacggcgacgactacgag
gagggcagcgacggaggggacgatgacgatgacgatgacggggagcgggacggcgacggg
gtcggttcgccgcgctccttccagtcccgcccgtggccgcagagctacagggaaacaact
gatacctacacgattgctgcatccccgagcttcggttacttgggcccgtctacaagcaaa
tactccctcctcgatcttggtcgtagcggtctgggctctgacctgaagttgcctttagta
tccgacaatgctgatggaaagcaagactttgtcaagaccttgcctaaaacacttggttca
ataagagatgagagagtctcatttcatttgcaacacactggagaagtctacattagtcaa
gggtgcaatgtgacacaaacagtcttcaatgggattaatgtacttgctggtgttggcctt
ctttccactccgtttacaattcacgaagctggatggacaggccttgcagttctagtatgt
tttgcaactgtttgctgttatactggaattcttctgaaacattgttttgagagcaaagat
ggtatttcaagttatccagacatcggagaggctgcatttggaagaattggtcgcctgttc
atatctattattttgtataccgagctatactcatattgtgtggaattcattattctggag
ggtgataacctcacatcaatttttcctaaagctagttttgattggcttgggtttcatgtc
gacgggaagcattttttcggagtgttaactgctattttggtcttaccaacagtatggctg
cgagatcttcgagtgctctcgtacctttcagcgggtggtgtgattgcaactcttttggta
ttcgtgtctgttggtttagtcagtgtaactgataatataggattccattcgacggggaag
gtagtaaactggaccggcatgccctttgctattggtgtttatggattttgctactctggg
cattcagtgtttccaaatatctaccaatcgatgtctgatcgctctaagttccctaaggca
ctgtttatatgttttgcaatttgcacagcaatatacggctcttttgctatcattggcttt
ctcatgtttggggagaatactttgtcacaaatcactttaaatcttccagagcattcggtt
gcctcaaaagttgccctatggacaacggtgatcaaccctttcaccaaatatgccttgttg
ttaaacccaatagctcgaggtttagaagagttgcgtcctgaaggttttatgaatgaaacg
tcctgttctattatactgaggactgcacttgttgcatcaactgtatgcattgcctttctt
atgccattctttggtcttgtgatggctctcattggatcacttctcagtatacttgtggca
gtcataatgccggccctgtgcttcctgaagatcgtacagaacaaagcgactcgttcacag
gtaatcgcaagcgttggcatcataatattgggcattatcagtgctatcgtggggacgtac
tcctccatagaaaggattgcagaaaactactaa
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