Setaria viridis (green foxtail): 117841018
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Entry
117841018 CDS
T07951
Name
(RefSeq) lysine--tRNA ligase, chloroplastic/mitochondrial
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117841018
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svs01007
]
117841018
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117841018
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
117841018
Amino acid related enzymes [BR:
svs01007
]
Aminoacyl-tRNA synthetase
Class II (A)
117841018
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117841018
Prokaryotic type
Other AARSs
117841018
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Imm5
Motif
Other DBs
NCBI-GeneID:
117841018
NCBI-ProteinID:
XP_034577476
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Position
9:complement(10797375..10805672)
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AA seq
583 aa
AA seq
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MEALRAWRASSNLLGFAASRAATAASAARPLHIRCCSAAAATTNQKPPPQDRRRRSASSS
SSTSDRDSIRAIRLKKVEELRGKGFEPYAYKWDRTHTTKELQEEYTHLENGEVCEEAAVS
IAGRIVARRAFGKLVFMTVRDDTGTIQLYCEKDSLTEDQFEQLKAFIDIGDILGASGSIK
KTEKGELSVYMKNFEILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADVFRTRAK
VVSEIRKTMESFGFIEVETPVLQGAAGGAEARPFITYHNSLQRDLYLRIATELHLKRMLV
GGLERVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMNMAEEIVTRCAMATHGKL
KVDYQGTEISLERPWRRETMHSLVKEATGIDFNNFGQDVESAKIAARGLPGIKVGSSEST
SLQSCSSVGHVLNEVFETFVESTLVQPTFVLDYPVEISPLAKPHRSYAGLTERFELFICG
REIGNAFSELTDPIDQRSRFENQIKQHNAKRAASAKVKSTEDQGDEDDYSYEVCLDEDFL
TSLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKIQQ
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgctgcgggcgtggagggcctcctccaatctcctcggattcgcggcctcccgc
gccgccaccgccgcctccgccgcgaggccactccacatccgctgctgctctgcggctgcc
gccaccacgaaccagaagccgccgcctcaggaccgtcgtcgccgtagtgcctccagctcc
agctccacctccgaccgcgactccatccgcgccattcgcctcaaaaaggttgaggagcta
agaggaaagggttttgagccatatgcttacaagtgggataggactcacacgactaaggag
ctccaggaagagtacacccatcttgagaatggtgaagtctgtgaggaggcagcggtctcc
attgccggtaggattgttgcccgaagggcatttggaaagcttgttttcatgactgtaaga
gacgatactgggactattcagctttactgtgagaaagacagccttacggaggaccaattt
gagcaactgaaggcatttattgatattggtgatatcttaggtgcaagtggatccataaag
aagacagagaaaggggaactatctgtttatatgaaaaattttgagatcctcacaaaatcc
ttactgccactaccagacaagtatcatggtttaactgatgtggacaaacgttatcgtcaa
aggtatgttgacatgattgcaaatcctgaggttgctgatgtattccgaactagagcaaag
gtggtttctgaaatccgcaagacaatggaatcatttggtttcattgaagttgaaactcca
gttctacagggagcagcaggtggtgctgaagctaggccttttataacctaccataactca
cttcaaagagatctttacctgaggattgcaacagagctgcatttgaaaaggatgttggtt
ggagggcttgagagggtctacgagattggaagaattttccggaatgaaggcatctctact
cgtcataatcctgaatttaccactattgagatgtatgaagcatattcagactatgaaagc
atgatgaatatggccgaagaaattgtcactcgatgtgctatggctactcatggcaagctt
aaggttgattatcagggaactgaaatttctctcgaaagaccatggaggagggaaaccatg
cattctcttgtcaaagaagcaactggaattgacttcaacaactttggccaagatgttgaa
tctgctaaaattgctgcaagaggactgccagggatcaaagtaggaagcagtgaaagtact
tcactgcaatcctgttcatctgttggacatgttctcaatgaggtttttgagactttcgtt
gaatctactctagtacaaccaacatttgtgcttgattacccagttgagatatcaccattg
gcaaaaccacatcggagttatgctggccttactgagcgattcgaactttttatatgtggt
cgtgagattggcaatgcattttctgagctcacagacccaattgatcagaggagccgtttt
gaaaatcaaataaaacagcacaatgctaaacgtgctgcaagtgctaaggtcaaatctact
gaggatcaaggagatgaggatgattattcctatgaagtttgtttagatgaagacttctta
acttctttagaatatggaatgccaccagcatcaggaatgggcctgggtatcgaccggtta
gtaatgcttttgacgaactctgccagcataagggatgttattgcctttcccgtcttgaag
attcagcaatag
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