Setaria viridis (green foxtail): 117841063
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Entry
117841063 CDS
T07951
Name
(RefSeq) transcription factor-like protein DPB isoform X1
KO
K04683
transcription factor Dp-1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117841063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117841063
03036 Chromosome and associated proteins [BR:
svs03036
]
117841063
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
117841063
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
117841063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
117841063
NCBI-ProteinID:
XP_034577523
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Position
9:complement(53549366..53554376)
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AA seq
387 aa
AA seq
DB search
MVSGVADNPDGGGGAPGAQLPPPPMGARAALGTLPVSGGAAHSASTSGGSAGSPSSRSEQ
NAPDGAGKGAAPGSAAAAVAASTPASETTFLRLNNLDINGDDAPSSQAPTSKKKKRGARA
VGPDKGNRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFTDPNNNIEAPDPENPNAQQY
DEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSISDIEDLKMELVGLKGRIEKKS
AYLQELQDQYVGLQNLIQRNEQLYGSGNTPSGGVALPFILVQVNKTRPHATVEVEISEDM
QLVHFDFNSTPFELHDDSYVLKEMRFCGREQHDSAQEMISNGGEGSSMSNIYWQQVQHPG
RPNNGTVGLPSSPPIPGILKGRVKHEH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggtctccggcgtcgcggacaacccggacgggggcggcggcgcgccgggcgcccagctc
ccgccgccgcctatgggggcccgggcggcacttggcacgctgccggtctccggtggcgca
gcgcactccgcgtctactagcggggggagcgccggctctccgtccagccgcagcgagcag
aacgcccccgacggtgctggcaaaggggcggctccggggtctgctgcggcggcggtggcg
gcgtccacgccggccagcgagaccacgttcctccgcctgaataatctcgacatcaacggc
gatgatgcgccgtcgtcgcaggctcctacgagcaagaagaaaaagaggggtgcacgggca
gttggtcctgataaaggtaaccggggactgcgccagttcagtatgaaagtttgtgagaaa
gttgaaagtaaaggcagaacaacatataatgaggtggcagatgaacttgttgctgagttt
acagatcccaataataatattgaggcaccagatcctgaaaatcccaatgcacaacaatat
gatgagaaaaatatacgacgaagagtttatgacgctttaaatgttctgatggctatggac
attatatctaaagataaaaaggagatccagtggaagggcttgcctcggactagcataagt
gatattgaagatttgaagatggagcttgtggggctgaaaggtaggattgagaagaaaagt
gcttacttacaggagctacaagaccaatatgtaggcctgcaaaacctgatccagcgaaat
gagcaattatatggttcaggaaacacaccttctggtggagtggctttgccatttatccta
gtacaggtgaataagacccgtcctcatgcaactgtggaagtcgagatatcagaagatatg
cagttggtgcattttgacttcaatagcaccccatttgagttgcacgatgactcgtatgtc
ttaaaagaaatgcggttctgtggaagagaacaacatgacagtgctcaagagatgatctca
aatggaggtgagggctcaagcatgtcaaatatttattggcaacaggtacagcatccaggg
cggccaaataatggcacagttggtttaccaagctcaccgcctattccaggaatactgaaa
gggcgtgtgaagcacgagcactag
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