Setaria viridis (green foxtail): 117841395
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Entry
117841395 CDS
T07951
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04136
Autophagy - other
svs04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
117841395
04136 Autophagy - other
117841395
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
svs01001
]
117841395
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117841395
Enzymes [BR:
svs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117841395
Protein kinases [BR:
svs01001
]
Serine/threonine kinases: Other
VPS15 family
117841395
Membrane trafficking [BR:
svs04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117841395
Autophagy
Autophagosome formation proteins
PI3K complex
117841395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIK3R4-like_middle
WD40
Pkinase
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WDR55
WD40_CDC20-Fz
EIF3I
HEAT
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_NOL10_N
Beta-prop_TEP1_2nd
PEP5_VPS11_N
PK_Tyr_Ser-Thr
Kinase-like
PPFR1_M
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
CFAP251_N
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
APH
Cohesin_HEAT
Tti2
Beta-prop_WDR41
TCAD9
HEAT_GCN1
DUF7691
YfhP_M
Motif
Other DBs
NCBI-GeneID:
117841395
NCBI-ProteinID:
XP_034577640
LinkDB
All DBs
Position
1:complement(39823544..39832020)
Genome browser
AA seq
1471 aa
AA seq
DB search
MGNKIARTTQASATEYYLHDLPSTYNLVLLDVVSRDRFLKSVRCKHDEGLLLVKVYFKRA
GEPIDLKEHERRLERIRNTFKGIEGSHVWPFQVWLQTDKAAYLLRQYFFNNLHDRLSTRP
FLSQIAKKWLAFQLIHAVEQSHSKGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPYD
DPSDYSFYFDTGGRRRCYLAPERFYEHGGESQVAADAPLQPSMDIFSLGCVLAELFLDGV
ALFEFSNLLSYRRGQYDPMLLLHKIQDTGIRDMILHMIQLDPQKRLPCRSYLQKYESVVF
PVYFSNFLHKFFSDIVPLDSDARVEKTQDNFEKILEIMMDSSTIEQIGRCTLSEHSEPSG
RKGTGGQILNSPGDSKKSTSVKKNALVDHQQIAGDINFLLKEVENRSNSTSTKITKDMDQ
DHIRSSQLVNPAGRGTGSGLTTRNNVVSHVQKISKSNLCSLVAGYDGQSDTYSFDIFQQI
DSKESCEGMVLLASLLCSCIRSVKKPELRRASLILLKFSSTYIDDDNRLQLVVPYVIAML
SDPAAIVRCAALETLCDVLCLVQDFPISDAVIFPEYILPMLSLLPDDTEESVRVCYASNI
HKLALTAYRFLLRSRSIADIGPLDESVVAPRSQSADSPAKKQDQFYAQLAELRKNIYEIV
QDLAMGQKQTPNVRRALLQDIGYLCYFFGHKQSNDFLLPILPAFLNDHDEQLRAVFFGQI
VFVCYFIGSRSVEEYLLPYLEQALSDGMEAVLVNALDCLTMMCKSGYLRKRVIVGLLGKV
LPLLRYPINWVKRSAVRFVAACSESLGAVDTYVYLSPHLRQFLHREPPSLSSEPALLSCL
KPPLPKSIFYQALEDAQDMGDILLKGGGKKELTVLGGRYPGIAQSGSSINLEDVARLKGP
NISSNMPFDVKDSVSSDKSLYSGFALHASAGNSSFYDGLSKGIPSYSVCTDKRGLGETQP
LPDSSVYKASIRLPWLEPNRPGVHTRDDYFSSKRRELSINDSIKSSSSLQGDSIPNSDTG
GLPSFSRSAVNLETGWKPRGILVAHLQEHRLSVNDIAVSNDNTFFVTASDDSSIKIWDTR
KLEKDIAFRSRLTYSMGTSRALCTTMVRGTSQVAVGASDGTLHLFSVDCARGVGSVVERY
SGIVDVKRNDIKEGAILSAVNCSSDSFSPTVLFSTEHCGIHKWDTRTNSESWSFKSSPEE
GYISALVVGQCGNWFISGSSRGALTLWDNRFLLPVNSWYYSTVSPIEKLCLLIPPPSSIS
SAGRPLVFVAAGCNEVSLWNAENGSCHQVFRTASTENEAVMPKTPSRPLNKSTTKDVRRP
GNYKYRIDELNDPPVRHPGIRSLLPLPGGDLLTGGTDLKIRYWDQARPEQSFCIAGPSAK
EVRSAKGDILEKAVGNNECYDIRSSFGVQVVQEMYKQTTTVSGLTPKTQLALAAADSAGC
HRDTILALASFNLSSQRLISASRDGAVKVWK
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagatcgcgcggacgacgcaggcgtcggcgacggagtactacctccacgac
ctgccgtccacctacaacctcgtgctcctcgatgtcgtcagccgcgaccgcttcctcaag
tccgtccgctgcaagcacgacgaggggctgctcctcgtcaaggtctacttcaagcgcgcc
ggcgagcccatcgacctcaaggagcacgagcggaggctggagcggattaggaacacgttc
aaggggatcgagggttcccacgtatggcccttccaggtttggttgcaaacagataaagcg
gcatatcttttgagacagtatttcttcaacaacctgcacgaccgactgagtacacgccct
ttcctcagtcagatagcgaagaaatggcttgcttttcagttaatccatgcagtggagcag
agccatagtaaaggagtttgccatggtgacataaaatgtgagaacgtgctcgttacttct
tggaattggctatatcttgcggacttcgcgtctttcaagccaacttacatcccatatgat
gatccatctgattattcattctacttcgacactggaggaaggcgaagatgctatctagca
cctgaaagattctacgaacatggtggggagtcccaagttgcagctgatgcacccctgcaa
ccatcaatggatatattttctcttgggtgcgttcttgctgaacttttccttgacggcgtg
gcactttttgagttttcaaaccttctgtcttatcggcgtggtcaatatgacccgatgctt
cttctacacaagatacaagatactggtattcgtgacatgatacttcacatgatccagttg
gacccccaaaaaaggctaccgtgtcgaagctatctacaaaaatacgaatctgttgtgttc
ccagtttatttttcaaactttctgcacaagttcttctcggatattgttccacttgactca
gatgccagggttgagaagactcaagacaattttgaaaagatacttgaaataatgatggac
agctcaacgattgaacagatcgggagatgtacattgtctgagcatagtgaaccatctggg
agaaaaggcacaggagggcaaattttaaactcgccaggagattctaaaaagagcacatca
gttaagaaaaatgctcttgtagaccatcaacagattgctggagatatcaatttcctcctc
aaagaagtggagaacaggagcaacagcacaagcacaaagataacaaaagacatggaccag
gaccatattcggtcctcacagctggttaatccagcaggaaggggaacaggaagtggtttg
acgacccggaacaatgttgtatcccatgtgcagaagatctcaaagagtaatttatgttcc
ttggtagctggttatgatggccaatcagatacctatagctttgacatttttcaacagata
gactccaaggagagctgtgaaggcatggtcttgcttgcctcattactctgctcatgcata
cgcagtgtgaaaaaacctgagctaagaagggccagtctcattcttctgaagttttcgtcc
acatacatagatgatgacaatcgcttacagctagtggttccctatgtgattgcgatgctt
tcagatccggctgccattgtccgctgcgctgctttggaaaccttatgtgatgtcctctgt
cttgtgcaagacttccctatcagtgatgctgttatattccctgagtacatcctcccaatg
ctctctttgcttcctgatgatacagaggagagtgttagagtttgctatgctagcaatatt
cataagctggctttaacagcttataggttcctacttcgttctcgtagcatagccgatatt
ggacctctggatgaatcagtggtagctcccagatcacagtctgcagattcaccagcaaag
aagcaagatcaattttatgcccagcttgcagaactgaggaaaaatatttatgaaatagtg
caagatttggctatgggacaaaagcagacacctaatgtccgcagagctcttctgcaggat
ataggttatttgtgttacttctttgggcacaagcaaagtaatgattttcttcttcctata
cttccggcatttctaaatgaccatgacgagcagctccgtgcagttttctttggccagatt
gtctttgtttgctatttcattggttcaaggagcgttgaggaatatcttttgccatatctt
gaacaggcactaagtgatggtatggaggctgtccttgtaaatgcacttgattgcttgacc
atgatgtgcaaaagtggttatttgaggaaaagagtaattgttggtctattgggaaaggtt
ctccccctgcttcggtatccaatcaattgggttaaacggtctgctgtaagatttgttgct
gcttgcagtgagagcctaggggctgtagatacttatgtgtacctttctcctcatctaagg
cagttcctacacagggagccaccttcattgtcctctgaacctgctcttctttcatgcctt
aagcctccactgccaaaatcgatcttctaccaagctttagaggatgctcaggacatggga
gacattttactgaagggtggtggcaagaaagaactgacagtacttggtggaagataccct
ggtatagcgcaaagtggatcctcaatcaatcttgaagatgttgcgcgattgaaaggccct
aatatttccagcaacatgccttttgatgtcaaagattcagtttcttctgacaaatcatta
tattctggttttgcactacatgcatctgctgggaatagttccttttatgacggcttatct
aaaggaataccatcatattctgtttgtaccgataagcgaggtttaggagaaacacagccg
ctccctgattcttcagtgtataaagcatcaataaggctaccttggttggaacccaaccgc
ccaggcgtgcatactagagatgattatttcagtagcaagcggcgagagttaagcataaat
gattctatcaagagcagttcctctttgcaaggggatagcattccaaactctgatactgga
ggattgccgtccttctccagatcagcagtgaacttggagactggatggaagcctcgtgga
atactagtggcacatctccaggagcatcgcttgtctgtcaatgatatcgccgtatcaaat
gataataccttttttgtgactgcttctgacgactcaagtatcaagatatgggatacaaga
aagttggaaaaggacattgccttcagatccaggttaacgtacagcatgggtactagccga
gctctttgtacgacaatggttcgtggtacttcacaggtggctgtcggtgcaagcgatgga
acactgcacttgttttctgttgattgtgcacgcggcgttgggagtgttgtggaaaggtat
tctggaattgttgatgtaaaaaggaatgatattaaagaaggtgcaattctaagtgctgta
aattgttcaagcgacagctttagcccaactgtccttttcagcactgaacattgtggcatc
cataaatgggatacaaggaccaactcagaatcttggtcatttaaatcctcaccggaggag
ggctatatatccgcacttgttgttggccagtgtggaaattggttcatctcaggttcttca
cgaggtgcccttaccctgtgggataataggtttttgctgcctgttaactcgtggtactat
tcaacagtaagccctatagagaaattgtgcttgcttatacctccaccaagttcaatatct
tctgctggaaggccattggtttttgttgccgccggctgcaacgaagtttccctatggaat
gctgagaatggaagctgccaccaggtgtttagaacggcaagcactgagaatgaagctgtg
atgccaaagacaccatcaagacctcttaacaagtcaactaccaaagatgtaagacgacca
ggcaattataagtacagaattgatgaattgaacgacccacctgtacgccatccaggcata
cgctctctgcttcccttacctggcggtgatctattgactggaggaacagacttgaaaatt
cgttattgggatcaagccagacctgagcaaagcttctgtatcgctggtccctcggccaaa
gaagtccgttcggcaaaaggagatattttggagaaagcagttggaaacaatgagtgttat
gatataagatccagttttggagtacaagtcgttcaggaaatgtacaagcaaacaaccacg
gtgtccggtttgacacccaagacacagctcgctttggctgctgcagactccgctgggtgc
caccgtgatactatacttgcattggcatccttcaacttgtcaagccagaggttgatatca
gccagcagagatggtgccgtcaaagtgtggaaatag
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integrated database retrieval system
