Setaria viridis (green foxtail): 117841486
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Entry
117841486 CDS
T07951
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svs01003
]
117841486
Enzymes [BR:
svs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
117841486
Glycosyltransferases [BR:
svs01003
]
Polysaccharide
Structural polysaccharide
117841486
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
117841486
NCBI-ProteinID:
XP_034577774
LinkDB
All DBs
Position
1:36279206..36283016
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AA seq
507 aa
AA seq
DB search
MVCKVATMGIKAADKLRFPSSAAAAAARSRMKPWMVRATTTVLLWTCVVQLTAVGNTWGP
RVLKGWPSCRTAREAAAAAAVTTTRLAMPEAVVEKAALPPKRIYRNNGYLMVSCNGGLNQ
MRAAICDMVAIARYLNITLIVPELDKTSFWNDPSEFQDIFDVEHFVTSLRDEVRILRELP
PRIKRGVELGKFHSMPPISWSDISYYHKQILPLIRKYKVLHLNRTDARLANNGLPLEIQR
LRCRVNYAALKFTPQIEELGRRVIRILRQNGPFLVLHLRYEMDMLAFSGCTQGCTPKEAE
ELTRMRYAYPWWKEKVINSFVKRKDGLCPLTPEEIALVLRALDIDKNMQIYIAAGEIYGG
KRRMASLTSAYPNVVRKETLLEPSDLMFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAK
VVEGHRRYMGFKKTILLDRKLIVELVDQYTSGSLRWDEFSSLIKAVHANRMGSATTRTVI
PDRPKEEDYFYANPQECLRHPNLLRTS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgcaaggtggcaacaatggggatcaaggcggcggacaagctcaggttcccgtcc
tcggcggccgccgcggcggcgcggtcgcgcatgaagccgtggatggtgcgcgccaccacg
acggtgctgctctggacctgtgtcgtgcagctcacggccgtggggaacacctgggggccc
cgcgtgctcaaggggtggccgtcgtgccggacggcgcgggaggcggcggccgccgccgcg
gtcaccaccacgcggcttgcgatgccggaggccgtcgtggagaaggccgcgctgccgccc
aagagaatttataggaacaatggttatttgatggtttcatgcaatggtgggcttaaccaa
atgcgagccgctatatgtgatatggttgccattgcaagatatttgaatataactttaata
gttcccgagttggataagacatcattttggaatgacccaagcgaatttcaggatatattt
gatgttgaacattttgtaacctctcttagagacgaggttcgtatacttagagaattgcca
ccgagaataaagagaggagtggaattagggaaattccactccatgcctcctatcagttgg
tcagatatatcttattaccataagcagattcttcctttgattcggaagtacaaggtcctc
catctgaatagaactgatgctaggttggcaaataatggtctgcctctggagattcagaga
ttgcgttgccgggtgaattacgctgcactgaaatttacaccccaaattgaagagttaggc
aggagagtaattagaatactccgccaaaatggcccctttttagttctccatttacgttac
gagatggatatgcttgctttctctggctgtactcaaggttgcactcctaaggaagcagag
gagcttacaagaatgagatatgcttacccatggtggaaagagaaagtaataaactctttt
gtgaaaagaaaagacggcctttgccctctgacgccagaggagattgctcttgtccttaga
gcattggatatcgacaaaaatatgcaaatatatattgcagctggtgagatatatggtgga
aaacgcagaatggcttctcttacctcggcttaccctaacgtggtgagaaaggagacactt
ctggaaccttctgatctcatgttctttcagaaccattcatcgcaaatggcagcgctggac
tacttggtatcgttggaaagtgatatctttgttccaacatatgatggcaacatggctaaa
gttgtcgagggccaccgcaggtacatgggcttcaagaaaacgatcctgttggatcgaaaa
cttatagttgagctggtagatcagtataccagtggttctttgcggtgggatgagttctct
tcattaatcaaggctgtccatgccaaccggatgggatcagcgaccaccaggacggtgatc
cctgacagaccgaaagaagaggactacttctatgctaaccctcaagaatgcctgcgacat
cccaatctgcttcgaacatcgtga
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