Setaria viridis (green foxtail): 117841548
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Entry
117841548 CDS
T07951
Name
(RefSeq) luminal-binding protein 3
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
5.6.1.10
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03060
Protein export
svs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
117841548
04141 Protein processing in endoplasmic reticulum
117841548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
svs03110
]
117841548
04131 Membrane trafficking [BR:
svs04131
]
117841548
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117841548
Enzymes [BR:
svs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.10 non-chaperonin molecular chaperone ATPase
117841548
Chaperones and folding catalysts [BR:
svs03110
]
Heat shock proteins
HSP70 / DNAK
117841548
Membrane trafficking [BR:
svs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
117841548
Autophagy
ER-phagy
ER stress-related proteins
117841548
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117841548
Exosomal proteins of other body fluids (saliva and urine)
117841548
Exosomal proteins of colorectal cancer cells
117841548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
FtsA
FGGY_C
Radial_spoke_3
DDR
ParM_N
Peptidase_S46
Motif
Other DBs
NCBI-GeneID:
117841548
NCBI-ProteinID:
XP_034577851
LinkDB
All DBs
Position
1:complement(10188786..10192699)
Genome browser
AA seq
665 aa
AA seq
DB search
MDRVRGSAFLLGVLLAGSLFAFSVAKEETKKLGTVIGIDLGTTYSCVGVYKNGHVEIIAN
DQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFQDKEVQRDMKLVP
YNIVNKEGKPYIQVKIKDGENKVFSPEEISAMILGKMKDTAEAYLGKKINDAVVTVPAYF
NDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILT
IDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKYSKDISKDNRALGKLRREAERAK
RALSNQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKSQI
HEIVLVGGSTRIPKVQQLLRDYFDGKEPSKGVNPDEAVAYGAAVQGSILSGEGGDETKDI
LLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSMTK
DCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLS
QEEIDRMVREAEEFAEEDKKVKEKIDARNQLETYVYNMKNTIGDKDKLADKLESEEKEKV
EEALKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIISAVYQKSGGAPGGGADEEGGVDD
DHDEL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggatcgggttcgcggatccgcgttcctgctcggcgtcctgctcgcaggatccctgttt
gcattctcagttgcaaaggaggagaccaagaagctcggcaccgtgatcggtatcgatctc
ggtaccacctactcctgtgttggtgtctacaagaacggtcatgtcgagatcatcgccaat
gaccagggtaaccgtatcacaccctcatgggttgccttcaccgatagtgagaggctcatc
ggtgaggctgccaagaaccaggcagctgtcaaccctgagcggaccatcttcgacgtcaag
cgtctcatcggaagaaagtttcaggacaaggaagtccagagggacatgaaacttgttccc
tacaacattgttaacaaggagggcaagccctacattcaggtcaagatcaaggatggagag
aacaaggtcttcagccctgaggagatcagtgccatgattcttggcaagatgaaggacacc
gctgaggcgtaccttggcaagaagatcaatgatgctgtcgtcactgttcctgcgtacttc
aacgacgcgcagaggcaggcgaccaaggatgctggtgtcattgccggcctcaatgttgct
aggatcatcaatgagccaactgctgctgctattgcctacggtttggacaagaagggtggc
gagaagaacatccttgtctttgaccttggtggtggtactttcgatgtcagcatcttgacc
attgacaacggtgtgtttgaggtgcttgccaccaacggtgacacccatcttggaggtgag
gactttgaccagaggatcatggagtacttcatcaagttgatcaagaagaagtacagcaag
gacatcagcaaggacaaccgtgctcttggaaagttgaggagggaagctgagcgtgccaag
agagccctcagcaaccagcaccaggtccgtgttgagattgagtccctcttcgacgggacc
gatttctcggagccgttgacccgtgccaggtttgaggagctgaacaatgatctgttccgc
aagaccatgggccctgtcaagaaggccatggaagatgctggccttgagaagagccagatc
cacgagattgtccttgttggtggaagcaccaggattcccaaggtccagcagctcctgagg
gactacttcgacggcaaggagcccagcaagggtgtaaaccctgatgaggctgttgcctac
ggtgctgcggtgcagggaagcatcttgagcggcgagggtggtgatgagaccaaagatatc
cttctccttgatgtggctcccctcaccctgggtattgagactgttggtggagtcatgacc
aagttgatccccaggaacactgtcatccccaccaagaagtcgcaggtgttcaccacctac
caggaccagcagaccaccgtctccatccaggtcttcgagggtgaacgcagcatgaccaag
gactgccgtcttctcggcaagttcgacctctctggcattccaccagctccaaggggcact
ccccagatcgaggtgacctttgaggttgacgccaatggtatcctaaacgtgaaggccgag
gacaagggcactggcaagtcagagaagatcacaatcacgaacgagaagggccgcctgagc
caggaggagattgaccgcatggtccgggaggcggaggagttcgccgaggaggacaagaag
gtgaaggagaagatcgacgcccggaaccagcttgagacgtacgtgtacaacatgaagaac
acgatcggcgacaaggacaagctggcggacaagctggagagcgaggagaaggagaaggtt
gaggaggccctcaaggaggccctcgagtggctggacgacaaccagtcggccgagaaggag
gactacgaggagaagctcaaggaggtggaggccgtgtgcaaccccatcatctcggcggtg
taccagaagtctggcggcgccccgggtggtggtgccgacgaggagggcggcgtcgatgac
gaccacgacgagctgtag
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