KEGG   Setaria viridis (green foxtail): 117841550
Entry
117841550         CDS       T07951                                 
Name
(RefSeq) uncharacterized protein
  KO
K07573  exosome complex component CSL4
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117841550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svs03019]
    117841550
Messenger RNA biogenesis [BR:svs03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     117841550
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     117841550
SSDB
Motif
Pfam: EXOSC1 ECR1_N S1_RRP4 CHASE5 RRP40_S1
Other DBs
NCBI-GeneID: 117841550
NCBI-ProteinID: XP_034577849
LinkDB
Position
1:complement(40609292..40612408)
AA seq 200 aa
MAATAMDQDGGGGDVVTPGELLGNSLTLVAGRGAYADGRSVRASVTGHRRIVPPAPGSDD
QRSTVEVVGHKAHGAVPQPGSVVIARVTKVMPRMANADIMCVDSKAIKEKFTGLIRQQDV
RATEIDKVDMYQSYRPGDIVRAVVLSLGDARAYYLSTAKNELGVVSAQSIAGGTLVPVSW
TEMQCDLTGQIEQRKVAKVE
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcggccaccgcgatggaccaggacggcggcggcggcgacgtggtcacgccgggggag
ctcctcggtaactcgttaaccctcgtggctgggcgcggagcctacgcggatggtcgctcc
gtgcgcgcgtcggtcacaggccaccgccgcatcgtgccgcccgcacctggctccgacgac
cagaggtctacggtggaggtggtggggcacaaggcccatggagccgtgccgcagcctgga
agcgtcgtcatcgcccgagtaacaaaggttatgcctagaatggccaatgctgatatcatg
tgtgttgactcaaaggcaatcaaagaaaagttcactggcctgataaggcagcaagatgtt
cgtgcgactgaaatcgacaaggtggatatgtaccagtcatatcggcctggggacattgtt
agagctgtggttctttctctcggtgatgcaagggcctattatctttccactgcgaagaat
gaacttggcgttgtttcagcacaaagtatagcgggtggcacattggtcccagtcagttgg
actgagatgcaatgtgacttgactggccaaattgaacaaaggaaagttgcaaaggtggaa
tag

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