Setaria viridis (green foxtail): 117841642
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Entry
117841642 CDS
T07951
Name
(RefSeq) ABC transporter F family member 3
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
svs03012
]
117841642
Translation factors [BR:
svs03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117841642
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_15
AAA
AAA_16
GTP-bdg_M
RsgA_GTPase
AAA_29
AAA_33
Motif
Other DBs
NCBI-GeneID:
117841642
NCBI-ProteinID:
XP_034577983
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Position
1:complement(41335417..41341295)
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AA seq
719 aa
AA seq
DB search
MAAAAAASMGVVREVLGPDVVEEVDQPIIDYIANVLADEDFDFGAPDGHGIFEALGELLI
NSGCVSGQDHCLQVCSKLCEKFGKHGLVKPKQAMRSLVTPLRMNAGMDEDVAPKKQPEVF
EGPLLSSRDKAKIERKKRKDERQREAQYQMHVAEMEELRAGMPPVYVDHSNDGGPAVRDI
HMENFSVTVGGRDLIQEATITLAFGRHYGLVGRNGTGKTSFLRAMAMHAIDGIPKNCQIL
HVEQEVVGDDTTALQCVLNADVERVQLLQEEARLVQQQKDLEIEVEFGEGSGKSKVDLDK
DSISKRLEEIYKRLEFIDADAAEARAASILAGLSFTPEMQRKRTKEFSGGWRMRIALARA
LFIEPDLLLLDEPTNHLDLHAVLWLETYLLKWPKTFIVVSHAREFLNTVVTDILHLHGRK
LHAYKGDYDTFERTREEHLKNQQKAFETNEKARSHMQAFIDKFRYNAKRASLVQSRIKAL
ERMEHVDAVVSDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPILFKNLNFGIDLDSRI
AMVGANGIGKSTILKLISGDLQPTSGTVFRSPKVRMAVFNQHHVDGLDLTVNPLLYMMRC
YPGVPEQKLRSHLGSFGVSGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHL
DLDAVEALIQGLLVFQGGVLMVSHDEHLITGSVDELWVVSDGRVTPFSGTFKDYKKMIK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcagccgccgcgagcatgggggtggtgcgggaggtcctgggccccgacgtc
gtcgaggaggtggaccagcccatcatcgactacatcgccaacgtcctcgccgacgaggac
ttcgacttcggcgcccccgatgggcacggcatcttcgaagcgcttggagagctcctcatc
aactccggatgcgtctccggccaggaccactgcctccaggtctgcagtaagctttgtgaa
aagtttggaaagcatggtctggtgaaacccaaacaagctatgcgtagtcttgttacaccg
ttacgtatgaatgcggggatggacgaggatgtcgctccgaaaaagcaaccagaagtattt
gagggaccattgctatcttcacgcgataaagccaagattgaacggaaaaaaagaaaggat
gagaggcaaagagaggcacaataccaaatgcatgtcgcagagatggaggaacttagggct
ggaatgcctcctgtttatgtagatcatagtaatgatggtggcccagctgttagggatata
catatggagaacttcagtgtcactgttggtggccgtgatcttattcaagaagccactata
acacttgcctttggaaggcactatggccttgttggaagaaatggtactgggaagacatct
tttctcagagctatggcgatgcatgcaattgatggtattcccaaaaactgtcagatattg
catgttgagcaagaggttgtgggtgatgacaccacggctttgcagtgtgttctgaatgct
gatgttgaacgagttcaacttctgcaggaagaggcccgcctggttcaacaacagaaagac
ctagagattgaggttgagttcggggaaggctcgggcaagagcaaggttgatctcgacaaa
gattctattagcaagaggcttgaggagatatataaacggctcgagttcatcgatgcagat
gctgcagaggctcgtgcggcatcaattttggcgggtcttagtttcactccagaaatgcaa
cgcaaacgtacaaaagagttttctggtggatggcgcatgagaatagctctagcacgtgct
ctgttcattgagcctgatttactacttcttgatgagccgacaaaccatcttgatctccac
gctgtgttatggctagaaacatatctcctgaagtggccaaagacatttattgttgtatcg
catgctagggagtttttgaatacggttgtcaccgacattcttcatctacatggtagaaag
ctacatgcttacaaaggtgactatgacacgtttgagaggacaagggaagagcaccttaag
aatcagcagaaagcctttgaaacaaatgagaaggccagatcccacatgcaggcattcatt
gacaagttccggtacaatgcaaagagagcatcgcttgttcaatcaagaatcaaggcattg
gagcgaatggaacatgttgacgctgttgtcagtgatccagactataaatttgagtttcca
accccagatgatcgccctggaccaccaatcattagcttcagtgatgcctcgtttggttat
cctggagggcctattttgtttaagaatttgaattttggtatcgacctcgacagccgcata
gcaatggttggtgctaatggcattggcaagtccactatactgaaattaatatctggagat
ctgcagccaacttctggaacagtattccgctcccccaaggtccgcatggctgtattcaat
caacatcatgttgatgggcttgatttaactgtgaatccccttctgtacatgatgaggtgc
tatccgggtgtacctgagcagaagttgaggtcacatctgggttcctttggtgtttcagga
aatcttgccctccagcctatgtatactttatcaggtggtcagaagagcagggttgcattc
gccaaaatcaccttcaagaaaccacacattatacttctcgatgagccttctaaccatctg
gatctggatgcagttgaggcactcatccaaggtttactggtgttccagggaggagtgcta
atggtgagtcacgacgagcatctcatcaccggaagcgtggacgagctttgggttgtgtca
gacggcagggtgacccccttctcgggcacgttcaaggattacaagaagatgattaaataa
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