Setaria viridis (green foxtail): 117841677
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Entry
117841677 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K19022
AP-5 complex subunit beta-1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117841677
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
117841677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
117841677
NCBI-ProteinID:
XP_034578036
LinkDB
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Position
1:41252593..41256374
Genome browser
AA seq
1093 aa
AA seq
DB search
MDRQLSPQEWEQLLDDFASSSSSPSRRQRWLHLPLLDLAVSSLPRRDLPSHLKPLLLSLI
DDHLLPPAPRSLPVLLTSFLSFPADHPLRDHLLTTVVSAFASALAAPVSKDHEAPPLAAL
VDALLAAANRPNHAPDRAARALACDALRALDAALPGLLAEALGHLYALAAAERSPAAQSY
LLLLASAARHAVRLGRLAATTSILAVAGPPTPFSVPAHLLSPPATSVAPPSEVNVRDIRK
VLALLMDRPQVLTPAAAMEMTAILAEVASAVLEWAPAIAAHIKVQFGGMVHSSNPMLLHS
LLTLFVRFPDAFGAEDERTMARRLALAAREAHRPLAARLLALHWLLGFTRFRNLVPGLAR
WFYPNLFDPLALKAKKLDCLAYVAAEVDGEKVAGGRASEQANRLLDDGLVCVSAFRCLPA
WSTETGVAFRALHRVLVIAAPHSTDDTCCSGAGELLNSTIFHHLQAILVDIALEHRGLVP
VIAEFTNRLLACNSHRWAGEWLLRTLDERLLPRLEPGYQLASYYPLFEKIAQNETVPQLR
LLELLTKQMVSLTKKHGPDTELKSWSQGSKVVGICRVMLKHHHSSHVFLPLSHLLVLTIE
SFPDLEVRDHARICLRMLSCVPGKKLRHLMGVGEQPSGVAPSHPGSLFDIPSPRPAQDLK
SMPDLVSYIHLERIVPLVVKQSWALTLPNFSVQSRPSGYILSIQDVSSTPSEQEKPAGPT
IERIGYTQETLRVMDSKGAETLQILRRYFACIPDYLHSSGLKIRIHCTFRFEPEPFNHAW
GLDSPVSGSDGADELPALYAVAITFSSSAQFGKIPSCHVPFILGEPPGSGMDIVPVDNQN
REESTYCASVVIELEPREPSPGLIDVSVAANTENCQVLSGSLKPITVGIEDMFMKAIVPP
DTPKEGVAMYYQDLFHALWEACDSSSNTGRETFPLSGGKGSAAINGTRSVKLMEVTPKVL
IGAVERYLASFVVSVAGDSLVTILRGNGVIKNVLWEESVSDASVGADALVPYSPDSNLQL
QLIDDDDIGVGSERYGHESKRDMGVMRVMIFLPPRYHLLFLMEVGCASTLVRIRTDHWPC
LAYVDEYLEALIS
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggaccggcagctctcgccgcaggagtgggagcagctccttgacgacttcgcctcctcc
tcatcctcgccctcccgccgccaacgatggctccacctcccgctcctcgacctcgccgtc
tcctcgctcccccgccgcgacctcccctcccacctcaagcccctcctcctctccctcatc
gacgaccacctgctcccgcccgccccgcgcagcctccccgtcctcctcacctccttcctc
tccttccccgccgaccacccgctccgcgaccacctcctcaccaccgtcgtctccgccttc
gcctccgccctcgccgcgcccgtctccaaagaccacgaggccccgcccctcgccgctctc
gtcgacgcgctgctcgccgccgccaaccgccccaaccacgcgcccgaccgcgccgcgcgc
gccctcgcctgcgacgccctgcgcgcgctcgacgccgcgctcccggggctcctcgccgaa
gccctcggccacctctacgcgctcgccgccgcagagcgctccccggccgcgcagtcatac
ctcctcctgctcgcctccgccgcgcgccacgccgtacgactcgggaggctggccgccacc
acctccatcctcgcggtggccggcccgcccacccccttctccgtgcccgcccacctgctc
tcgcctcccgccacgtctgttgcgccgccctcggaggtcaacgtcagggacataaggaag
gtgctcgccctgctcatggaccggccgcaggtgctcacgcccgcagcggccatggagatg
acggccatcctcgcggaggtcgcgtccgctgtgctcgagtgggcgccagcgatcgcagcg
cacatcaaggtgcagtttgggggaatggtgcattcctccaaccccatgctgctacactcg
ctgctcacgctcttcgtgcggttcccagatgcgtttggggccgaggatgagcgcacaatg
gcgcgccgattagctttggctgctcgtgaggcgcaccgcccactcgcagcacgattgctg
gctttgcattggctacttgggtttaccaggttcaggaatctagtgcctgggcttgcccga
tggttttaccctaacttatttgatccccttgcgctcaaggccaagaagctggattgtcta
gcttatgttgctgctgaagttgatggggagaaggttgcaggaggaagagctagcgagcaa
gcgaacaggctccttgatgatggcttggtttgcgtctccgccttcaggtgtcttccggca
tggagtactgaaacgggtgtggcattccgagcgctgcacagggtcttggttattgctgct
cctcacagcaccgatgacacgtgctgctccggggctggtgagctcctgaattctactatc
ttccaccatttacaggctatcttggttgatattgcattggagcatcgcggtttagtccca
gtgatcgcagagttcaccaaccgtctgctagcttgtaactcacatcggtgggctggggag
tggttgctccggacacttgatgagcgcctgcttccaaggcttgagccaggctaccagctt
gcgtcgtactaccctctttttgagaagattgcacagaatgagacggtgcctcagctccgc
ctattagaattgctcaccaagcagatggtttctctcaccaagaagcacggcccagacaca
gagctaaagtcatggtctcagggaagcaaggttgtgggcatttgccgtgtcatgctgaag
catcatcacagctctcatgtcttccttcccctttcgcatcttcttgtgctcaccattgag
tccttccctgatcttgaggttcgggaccatgcaaggatttgcttgcggatgttatcttgt
gttcctgggaagaaactgaggcatctcatgggagttggcgagcaaccttcaggtgtcgcg
ccttctcatccgggttccttattcgacatcccatcaccacgtcctgctcaggatcttaag
agcatgcctgatctggtgtcatacattcatcttgaaaggattgttcctctagttgtaaag
caatcgtgggccctcacattgcctaatttcagtgtccagagcagaccatctggttacatt
ctaagtatacaggatgtgagctctactccctctgagcaagaaaagccagcaggaccgaca
atagagagaattggctatacacaagaaacacttcgtgtgatggattctaaaggtgctgaa
acattgcaaatcctcagaaggtacttcgcgtgcattcctgactacctgcactcatctggt
ctcaagataagaatacactgcacatttagatttgagccagagccatttaaccatgcatgg
ggattggattcgccagtttcaggttctgacggggctgatgagttgccagccctttatgca
gtggcaattacattctcgtcaagtgcacagttcggaaaaattccctcatgtcatgtacct
ttcatactaggggaacctcctggttctggtatggacattgtccccgtagataatcagaac
agggaagaatccacttactgtgcttcagtggtgattgagctggaacctcgagagccttca
cctggccttattgatgtttcagttgcagcaaatacagagaactgtcaagtcttatcaggg
tcccttaaacctattacagttggcattgaggacatgtttatgaaggccattgtaccacct
gatacaccaaaagagggtgtggctatgtactatcaggatctgtttcatgctttatgggag
gcctgtgatagttcttctaacacaggtcgagagactttccctttgagtggagggaaggga
tcagctgccattaacgggactcggtctgttaagcttatggaggtaactccgaaggttttg
attggagctgttgaaagatacctggcttcctttgttgtcagtgttgctggagattcactt
gtaaccattctgagaggaaatggagtcattaagaacgttttgtgggaagaaagtgtctca
gatgccagtgtaggtgctgatgcattggttccatattcaccggacagcaatctccagctt
cagcttatagacgacgacgatattggggttggttctgagaggtatggccatgaaagcaag
agggatatgggagtcatgcgtgtcatgatattcctaccacctaggtatcacctcctcttc
ttgatggaagtaggttgtgcctccacattggtcaggataaggactgatcattggccttgc
cttgcatatgtggatgaatacctggaagcgttgatttcttag
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