Setaria viridis (green foxtail): 117841691
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Entry
117841691 CDS
T07951
Name
(RefSeq) protein argonaute 1C
KO
K11593
eukaryotic translation initiation factor 2C
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117841691
03036 Chromosome and associated proteins [BR:
svs03036
]
117841691
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117841691
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117841691
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
117841691
microRNA pathway
RISC loading complex
117841691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
117841691
NCBI-ProteinID:
XP_034578055
LinkDB
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Position
1:complement(41330572..41338520)
Genome browser
AA seq
1023 aa
AA seq
DB search
MGSRRGRQHPGVGEGSQPPHPQPAGRGGGRGGNQGRGGGRSARADEAQQQPPPPRGEHPG
RGHARGGTRPLPQQYPRAARPGQGAGPSATGSSSPLAPELRQAMEAPHELAQASPRHAGP
SQSQPQIEEHKLAEASAGSEIAPAIPSSSKSVRFPLRPGKGSVGTRCLVKANHFFAQLPD
RDLHQYDVSITPEVTSRILSRAIIKELVNLHRQSHLGGRLPAYDGRKSLYTAGALPFTSQ
EFHITLLDDDDGSGSERRRRSFKVVIKFAARADLHRLEMFLAGRHAEAPQEALQVLDIVL
RELPSARYAPFGRSFFSPVLGRRQPLGDGLESWRGFYQSIRPTQMGLSLNIDMSATAFIE
PLPVIEFVAQLLNSDIHSRPLADAERVKIKKALRGVKVEVTHRGNMRRKYRISGLTTQAT
RELTFPVDEGGTMKSVVQYFQETYGFAIQHTYLPCLQVGNQQRPNYLPMEVCKIVEGQRY
SKRLNQNQIRALLEETCQHPRDRERDIIRMVKHNAYEKDDYAQEFGIKISDRLASVEARI
LPAPRLKYNETGREKDCLPRVGQWNMMNKKMVNGGKVRSWICVNFARNVQESVVRGFCHE
LALMCQASGMDFSREPVLPPLYARPDQVERALKARYHDAMNVLGPQRRELDLLIGILPDN
NGSLYGDLKRVCEIDLGIVSQCCCTKQVFKMNKQILANLALKINVKVGGRNTVLVDAVSR
RIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIE
DLYKVWQDPQRGTVSGGMIRDLLISFKKSTGEKPQRIIFYRDGVSEGQFYQVLLYELHAI
RKACASLEANYQPKVTFVVVQKRHHTRLFAHNHNDQNSIDRSGNILPGTVVDSKICHPTE
FDFYLCSHAGIKGTSRPAHYHVLWDENNFSADELQTLTNNLCYTYARCTRSVSIVPPAYY
AHLAAFRARFYMEPETSDSGSVASGPAGRGQQPTSRSARPPGGAAVRPLPALKDNVKRVM
FYC
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgaggaggggaaggcagcatcctggtgttggcgagggctcacagcccccgcat
ccgcagcctgctggaagaggaggcggtcgtggtgggaatcaggggcgcggtggagggcgt
tcagctcgtgctgacgaggcccagcagcagccgccgccgccgaggggagagcatccgggc
aggggacatgctcgtggtggaacacggccgctgccgcaacagtacccacgtgctgctagg
cctgggcagggggctggcccgtcagccaccggatcatcgagccctttagctcccgagctg
cgccaagcaatggaagctcctcacgagcttgctcaagcctcaccacggcacgcaggtcct
tcacaatcacaaccacagattgaggagcacaagctcgccgaggctagtgcaggcagtgag
attgcgcctgcgattccttcatcaagcaagtcggtcaggtttcctttgcgcccaggaaaa
ggtagcgttggcaccaggtgtttggttaaggccaatcatttctttgcgcaactgccagac
agggatcttcatcagtatgatgtctcaatcacaccagaagtcacgtcacgaatccttagt
cgagccataatcaaggagttggtgaatctccacaggcaatctcatttgggtgggcgcctt
ccagcctatgatggtaggaagagcctgtacacagccggcgcgttgccgtttacttcccag
gaatttcatatcactttacttgatgatgatgatggctctggttccgagaggcgacgtagg
agttttaaggtagtcattaaatttgctgcacgagccgacctccaccgtctcgagatgttt
ttagctgggaggcatgcagaagctcctcaagaggcattgcaagttcttgatattgtgctg
cgggagctgccttctgcaagatatgcaccatttggccggtcgttcttttcgcctgtcttg
ggccgaaggcagccccttggcgatggattagaaagctggcggggattttatcagagcatc
aggcctacccagatgggcttgtcactgaatatcgatatgtcagcaacggctttcattgag
ccattacctgtaattgaatttgttgcacaactgctgaattctgacattcactctaggccc
cttgcagacgcagaacgtgtgaagatcaagaaggccttgagaggagttaaggtggaagtt
actcatcgtggcaacatgcggagaaagtatcggatatctggattaactactcaggcgact
cgagagttaacttttcctgttgatgaagggggtacaatgaagtcagttgtacaatacttt
caagagacatatggctttgccatccaacacacctaccttccttgccttcaagttggcaat
caacagcgtccaaattacttgcccatggaggtctgcaaaatagtggagggacagaggtac
tccaagagattaaaccaaaatcagataagggctcttttggaggagacatgccagcaccca
cgtgatcgtgaacgtgatataattcggatggttaaacataacgcctatgagaaggatgat
tatgcgcaagagtttggcattaagattagcgatcgtctggcatcagtagaggcacggatt
ttaccagctccacggcttaagtacaatgagactggtcgagagaaggattgcttgcctaga
gttggtcagtggaatatgatgaacaagaaaatggtaaatggtggtaaagtcagaagctgg
atatgtgtcaatttcgcccgcaatgtgcaagagagtgttgttcgtgggttctgtcatgaa
cttgcactgatgtgccaagcgtcaggaatggacttttctcgggagcctgttcttccacct
ctatatgcacgtcctgatcaagtggagcgagctctgaaagctaggtaccatgatgccatg
aatgttcttggaccccaacgcagggaacttgatttacttatcggaatactacctgacaat
aacggctcactttatggtgatttgaagcgtgtatgtgaaatagatcttgggatagtttca
cagtgctgttgtacaaagcaggtgttcaaaatgaacaaacaaattcttgcaaatcttgct
ctgaagataaatgtcaaggttgggggcaggaacaccgtactggtagatgcagtctcaagg
cggattcctctggtaactgacagacctacaatcatatttggtgctgacgtgactcatcct
catcctggagaggacagcagtccctcaattgctgctgttgtggcctcccaagattggcca
gaggtgacaaagtatgctggattagtgtctgctcaagctcatcgtcaagaattgatagag
gatttatataaggtctggcaagacccacagagagggacagttagcgggggaatgataagg
gatctacttatatccttcaaaaaatcaactggggagaagccccagcgaataatattttac
agggatggtgttagtgaaggacaattttatcaagttctgctgtatgagctccatgcaatc
cgaaaggcatgtgcctccctggaagcgaactaccaaccgaaggtgacttttgttgtggtt
cagaagcgccatcataccagattatttgctcacaaccacaatgatcaaaattcaattgac
aggagtggaaacatactcccaggtacggttgtagattcgaagatctgccatcctactgag
tttgacttctacttgtgcagccatgctggcattaagggcactagccgtccagctcattat
catgtcttgtgggatgagaacaacttctctgctgatgagttgcagactcttaccaacaac
ctctgttacacttatgcaaggtgcacacgctctgtatcaatcgttccaccggcgtattat
gctcacctggctgccttccgagctcgtttctacatggaaccagagacctctgacagtggt
tctgtggcaagtggtcctgcaggccgtggacagcagccaacatcccgcagcgctcggccc
cctggtggtgcagctgttaggccacttccagctctgaaggataacgtaaaaagggtcatg
ttctactgctga
DBGET
integrated database retrieval system
