Setaria viridis (green foxtail): 117841707
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Entry
117841707 CDS
T07951
Name
(RefSeq) protein ELC
KO
K12183
ESCRT-I complex subunit TSG101
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03250
Viral life cycle - HIV-1
svs03272
Virion - Hepatitis viruses
svs04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117841707
03272 Virion - Hepatitis viruses
117841707
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117841707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117841707
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117841707
Membrane trafficking [BR:
svs04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
117841707
Exosome [BR:
svs04147
]
Exosomal proteins
Proteins found in most exosomes
117841707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
hemP
Motif
Other DBs
NCBI-GeneID:
117841707
NCBI-ProteinID:
XP_034578075
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Position
1:complement(41384024..41385419)
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AA seq
396 aa
AA seq
DB search
MARSPPPPPSAGGAQYAQQFLNTALSQRGPSALPYAEDVKWLIRNHLVALAEAYPSLHPK
AALFTHNDGRAAHLLQADGTIPIHHAGASYNLPAVIWLPEPYPRSPPLVFLSPTRDMVIK
PHHPLVDRSGLVANAPYLRSWVFPSSNLVDLVRSLSHLFGLDPPLFTRNPPPPAPNPSPP
APPPRVTPSPSPSPSYRLGGFPASPQLAHRPPPTEDPAEVFKRNAVAKLVDMAYADAAAL
RPAREAEVDALFAVQAELRHRGDLVAQGVRRMGEEKEALERRLQDVMMATDVMEAWVVEN
NRRGNTQATEDAIEPADVLSRQMIECTAADLALEDTIYALDKAIQEGSVPFDGYLRSVRA
LSREQFFHRALSAKVHSEQQRAKVASMAARAPQYAS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcccggtcgccgcctcccccgccgtcggccggcggcgctcagtacgcgcagcagttc
ctcaacacggcgctgtcgcagcgggggccgtcggcgctgccgtacgcggaggacgtcaag
tggctgatccgcaaccacctggtggcgctggcggaggcctacccctccctccaccccaag
gccgccctcttcacccacaacgacggccgcgccgcccacctcctccaggccgacggcacc
atccccatccaccacgccggcgcctcctacaacctccccgctgtcatctggctgcccgag
ccctacccgcgctccccgccgctcgtcttcctctcccccacccgcgacatggtcatcaag
ccccaccacccgctcgtcgaccgctccggcctcgtcgccaacgccccctacctccgctcc
tgggtattcccctcctccaacctcgtcgacctcgtccgatccctctcccacctcttcggc
ctcgacccgcccctcttcaccaggaaccctccgcctcctgctcccaatccctcgccgcct
gctccgcccccgcgggtcaccccctccccctccccctccccctcctacaggctcggcggc
ttccccgcgtcgccccagctcgcccaccgcccgccccccaccgaggaccccgccgaggtc
ttcaagcgcaacgccgtcgccaagctcgtcgacatggcctacgcggacgccgccgccctg
cggcccgcgcgggaggccgaggtcgacgccctcttcgccgtccaggcagagctgcgccac
aggggtgacctcgtcgcccaaggggtgcgcaggatgggggaggagaaggaggcgctcgag
cgccgcctgcaggacgtcatgatggccaccgatgtcatggaggcctgggtcgtggagaac
aacaggagaggcaacacccaggccacggaggacgccatcgagcctgcagatgtgctgtcc
aggcagatgatcgagtgcacggcggcagatttggcgctagaggataccatctatgcgctc
gacaaggccattcaggaagggtctgtgccctttgacggctacctcaggagcgtccgcgca
ctgtcacgcgagcagtttttccaccgcgccctgtctgccaaggtgcacagcgagcagcag
cgggctaaggttgctagcatggcagcccgggcaccacagtacgcatcctag
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