Setaria viridis (green foxtail): 117841932
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Entry
117841932 CDS
T07951
Name
(RefSeq) zinc finger CCCH domain-containing protein 59
KO
K24939
CWF19-like protein 1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117841932
Spliceosome [BR:
svs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117841932
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf-CCCH_DUS3L
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Torus
zf-CCCH_10
zf-CCCH_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
117841932
NCBI-ProteinID:
XP_072148306
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All DBs
Position
2:26924966..26930285
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AA seq
606 aa
AA seq
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MAATPLTPAPPRILLAGDAHGRLHQLFKRVKSVNQSTGPFHALLCVGQFFSPEGDAEGAP
GDVADYLEGRATVPIPTYFTGDYGPAAPRLLSKAAAGARGFAPGGIEICPNLFWLRGSNR
FTLHGLSVVYLSGKKGPGGPGCYSQDDVDALRALAEEPGIVDLFLTNEWPTGVTNGADTS
SVPNQVLDPHGFDPVVAELVAEIKPRYHIAGTKCVFYSREPYVNDSAAHVTRFIGLANVG
NKEKQKFIHAISPTPASTMSSADIHAKPPNATLSPYAASAKSVPIEETPKRPADNTDAQY
WRYDVKRQRQGEGDGGRLCFKFTSSGSCPRGSKCNFRHDEEAVEHYQRNVCFDFLNKGKC
ERGLDCKFSHSLETSVGDARPRSERRRAESRCWFCLSSPDVESHLVISIGEAYYCALAKG
PLVPNHVLMIPVEHCPSTLMMPAEAEVELGRYKNALAKYFEKQGKTAVYFEWVSQHTRHA
NLQAVPVPLSKADAVNKIFHIAAKRLDFEFSVVNPGDGAKVARESLISQSESKSSLFYVE
LPEGKILLHTIDSNEKFPAQFGREVLAGLLSMADRADWRNCKVSNEEEIQMVDDFKQGFR
EFDPAE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccccgctgaccccggcgccgccgcgcatcctcctcgccggcgacgcccat
ggccgcctccaccagctcttcaagcgcgttaaatcggtgaaccagtcgacggggccgttc
cacgcgctgctctgcgtggggcagttcttctctcccgaaggtgatgccgagggggcgccg
ggggacgtcgcggactacctcgaggggcgcgccaccgtgcccatcccgacctacttcacc
ggcgactacggcccggcggcgccgcggctgctgtcgaaggccgccgctggtgcacgcggg
ttcgcgcccggcggcatcgagatatgccccaacctcttctggctcaggggcagcaaccgc
ttcaccctccatggtttgtcagtggtttatttgtcggggaagaagggaccaggagggcct
ggctgctacagccaggatgatgtcgatgccctgcgggctcttgcagaagagccaggaatt
gttgatctgttcttgactaacgaatggccaactggagtgacgaatggggctgacacttcc
agtgtgcctaatcaggttttggatcctcatgggtttgatcctgttgttgctgaattggtt
gccgagattaagccaagatatcatattgctggtacgaaatgtgtcttttattcaagggaa
ccatatgtcaatgattctgctgcacatgttacccgctttattggacttgctaatgtcgga
aacaaagaaaagcagaaatttattcatgcgatttctcctactccagcatctaccatgtcc
agtgctgatatccatgccaagcctccaaatgccactttatcaccttatgccgcttcagca
aaatcagtacctattgaagaaactccaaaacgtccagctgacaacactgatgcgcaatat
tggcgttatgatgtcaagcggcaaaggcaaggggaaggtgatgggggtagattgtgtttc
aaatttacatcctcagggtcctgtccacgagggagtaaatgcaactttaggcatgacgag
gaggcagtggaacattaccagagaaatgtctgttttgattttctaaataaaggaaaatgt
gagaggggcttggattgcaagttttctcacagcctggagacttctgtaggagacgcaaga
cctcgtagcgaacgaaggcgtgcggagagccgttgctggttctgcttgtcaagtccagat
gttgagtcacatcttgtcattagtatcggagaagcttactactgcgcacttgcaaagggt
cctcttgttccaaatcatgttttaatgatacctgttgaacattgccccagtacattaatg
atgcctgcggaagcagaggtagaacttgggaggtataagaatgctctggctaagtacttt
gagaagcaaggaaagacagcagtatactttgagtgggtttcacagcacacccgccatgca
aaccttcaggctgttccggtaccattatctaaagcagacgcagttaataagatattccat
atagcagcgaaaagactggattttgaattctcggtggtgaatccaggtgatggtgcaaaa
gttgctagagaatcattgatatctcagtctgaaagcaaatcaagcctgttttatgttgag
ctcccggaaggcaaaatactcttgcatacgattgacagtaatgagaagttccctgcccag
tttggacgtgaggttttagcgggattgctaagcatggcagatcgtgcagattggagaaac
tgcaaggtctcgaatgaagaagagatccaaatggtggatgatttcaaacaaggtttccgc
gagtttgatcctgcggagtga
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