Setaria viridis (green foxtail): 117842054
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Entry
117842054 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X1
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
117842054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117842054
Membrane trafficking [BR:
svs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
117842054
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PGAP1
Abhydrolase_6
Abhydrolase_1
Palm_thioest
DUF676
Hydrolase_4
PGAP1_3rd
LIP
Motif
Other DBs
NCBI-GeneID:
117842054
NCBI-ProteinID:
XP_034578283
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Position
2:21562042..21572762
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AA seq
1106 aa
AA seq
DB search
MGGGGGGFRGSCRVGAVLLFSAWVALAALSRLLRPVPNGCVMTYMYPTYIPIAGAPRNVS
SDRYGLFLYHEGWKQIDFAKHIRGLRGVPVLFIPGNGGSYKQVRSLAAESFKAYQNGPLE
PTFYREASSTFAGDEPKDFSIPSRYGRMLDWFAVDLEGEHSAMDGRILEEHTEYVVYAIH
RILDQYKESHLERTKGGAQSSHNLPSNVILVGHSMGGFVARAALVHPNLRKSAVETILTL
SSPHQYPPIALQPSLGHFFSHVNEEWRKGYKTGVSHASSPKLSNVVVVSISGGIHDYQIR
SRLASLDGIVPSTHGFMVGSSSMKNVWLSMEHQSILWCNQLAVQVAHTLLSIIDPVNGQP
FLSTQKRVFVFTKMLQSAVPQSLSSMTHVPGSLSSNLPASDNWDAGEVQQKDSPSCPPST
QWTSDGLEKDLYIQSNSVTVLAMDGRRRWLDIKKLGSNGRGHFVFVTNLAPCSGVRIHLW
PEKHHLPVENELPASKKILEVTSKMVQIPAGPAPKQVEPGSQTEQPSPSAFLLLSPEEMN
GFSFMTISVAPRPTISGRPPPAASMAVGQFFNPEEGASALSIGRIIGSSFAPEEIFLSED
HPLALNLSFSASLGLLPVTLSLKTAGCGIKDAGDQMEAERNNLCKLRCFPPVALAWDSVS
GLHIIPNIYSETVVVDSSPAFWDSPEGTDRTTVMILADPHCSYKVTARASLSAAASRFFL
LYSSEILGFMVAIMFFGLMRQSSAWECDSSVPSILSAIESNLGLPKPFMFLCFMPILLFL
AFLFFTTEQKPPFGTFLLVTVICYIVANGFTILLILSSKLFLYAVAILHVFIKRRWQSWG
DGVQSAFLRQFFTFSFSLQSLKIVQMLKNNPNIIVAIATLPLVCLVHPAIGLGLLLLSHT
FHAHSNLCSFLAASFRSITQKKDLYKSKMGDGPVLLSKSKSDGLQQLLPMGDSPTAPKSF
TDSQLELFDCRHGIMILHLLTTLMFAPSLVAWLQRIGMGQNFPWFIDSAICVGVILHGLF
GSQPNVSCCISFKLPGRRRREVGLSFLYLLAGYYSFVSSMALAPYRALYAMAIIGYICFA
SRVIERRNMVRGDISSRRSRKHSHRH
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggcggcggcggattccggggcagctgccgggttggggctgtgctgctcttc
tccgcctgggtcgcgcttgcggcgctcagcaggctgctgcggccggtgcccaacggctgc
gtcatgacatacatgtacccgacctacatccccatcgccggcgcgcccaggaatgtctcc
tccgacaggtacgggctcttcctgtaccacgagggctggaagcagatcgacttcgcaaag
cacattaggggacttagaggcgtgcccgtgctcttcattcccggcaacggaggaagctac
aagcaggtccggtcgttggctgcggaatcttttaaagcgtatcagaatggtccacttgag
cccacattttatcgggaagcatctagcactttcgcaggggatgaacccaaagatttttca
attccatcacgatatggtcgcatgctggattggtttgctgttgaccttgaaggagagcac
tctgcaatggatggtcggatacttgaggagcatactgaatatgttgtatatgccattcac
aggatccttgaccaatataaagaatcacatttagagagaacaaagggtggtgctcaatcc
tctcataacttgccgtccaatgttatactcgttggccattcgatgggtggttttgtggct
cgagcagctcttgtccacccaaacttgaggaaatcagctgtggaaactatattgacactt
tccagcccacaccagtaccctcccattgcacttcagccatccttgggtcattttttctct
catgtcaatgaagaatggagaaagggatacaagactggagtatcacatgcaagcagtcca
aagttatcaaatgttgttgttgtgtctatatcgggtgggattcatgattatcagattagg
tcaaggttggcatcactggatggaattgtgccttctacacatggatttatggtaggaagc
tccagtatgaagaatgtttggttatccatggagcatcaatctatcctatggtgcaatcaa
ttagctgtacaggttgctcacactcttcttagcatcatagatcctgtcaacgggcagcca
tttttgagtacacaaaaaagagtttttgtgttcacaaaaatgcttcaaagtgctgttcct
cagtctttgagttcaatgactcatgttcctggttctctatcatcaaatttgcctgccagt
gataactgggatgctggagaagtacagcaaaaagattcaccttcttgcccaccatccact
caatggaccagtgatggccttgaaaaggacctgtacattcagtcaaattcagttaccgtt
ttagcaatggatggcaggagaagatggttagatattaaaaagctgggatcaaatggcaga
ggacactttgtttttgtaacaaatcttgctccatgttctggagtaaggattcacttgtgg
ccagaaaagcatcatttacctgtggaaaatgaactacctgccagtaaaaagatattggaa
gtcacgtcgaagatggtccaaattcctgcaggacctgctccaaaacaggttgaacctggg
agtcaaactgagcaaccatctccttctgcatttcttcttttaagtccagaagaaatgaat
ggtttcagcttcatgaccatatcagtggcgcctcgaccgacaatttcaggtaggcctccc
ccggcagcctctatggcagtgggacagttcttcaatccagaggaaggggcaagcgcactt
tctattggcaggattattggctccagttttgctcctgaagaaatatttctgtcagaggat
cacccgttggctcttaacttgtcattttctgcaagtctcggccttctaccagtaacatta
tcactgaaaactgctggatgtggaataaaagatgctggtgaccaaatggaagccgagaga
aataatctttgtaagttgcggtgcttcccacctgtagctttggcatgggattctgtatca
ggcctacacatcattccaaatatatactcagagactgtagtggtcgattcatcacctgct
ttttgggactcgcctgaagggacggacagaactacagtaatgatcctggctgacccacat
tgctcatataaagtcactgctcgtgcttcactaagtgctgcggcaagcagattcttttta
ttgtactcatcagagattcttggtttcatggtggccataatgtttttcggcctgatgcga
cagtcgtcagcatgggaatgcgattcttctgtgccatccattttatcagctatagagtct
aatcttggactaccaaagccattcatgtttctttgcttcatgccgatacttctatttctt
gcctttttatttttcacgactgagcaaaaaccaccatttgggaccttcttgttggttact
gtgatctgctatatagttgctaatggtttcacaatcttgttgatactaagttcaaaattg
tttctgtatgcggttgccattctacatgtctttatcaagagaagatggcaatcatggggg
gatggtgttcaatctgcatttcttcgtcaattcttcactttctctttctcattgcagtca
ctgaagattgtgcagatgcttaagaacaatccaaatataattgtagcaattgctacttta
ccacttgtctgtttggttcatccagctattggccttggtctgctacttctctctcatacc
ttccacgcccattcaaatctatgcagctttttagcagcttcttttcgtagtatcactcag
aaaaaggacttgtacaaatccaagatgggtgatggtccagttctgctttccaaaagtaaa
tcagatgggctccagcaacttctgccaatgggtgatagcccaacggcgcctaaaagcttt
actgacagtcaactagaattgtttgattgtcggcatggcatcatgattttgcatcttcta
accacactcatgtttgcgccttcacttgttgcttggctacagaggattggtatggggcag
aattttccctggttcatagattcagctatttgcgttggtgttatactgcatggactattt
ggatcccaaccgaatgtcagctgctgcatatctttcaagctacctggaaggagaaggcgc
gaagttggtctgagcttcctctacctcctggctggctattattccttcgtaagctccatg
gctttggcgccatatagagccttgtatgccatggcaatcatcggttacatatgttttgct
tccagagttattgagagaagaaatatggtgagaggtgacattagctctaggagaagtcgg
aagcactctcatagacactga
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