Setaria viridis (green foxtail): 117842118
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Entry
117842118 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117842118
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117842118
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117842118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
ZapB
DUF6262
FtsL_2
Lzipper-MIP1
HMMR_C
Motif
Other DBs
NCBI-GeneID:
117842118
NCBI-ProteinID:
XP_034578363
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Position
2:10411860..10412807
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AA seq
225 aa
AA seq
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MDNLNSHSEHADQPQGQQANGLPLDGINPVPFGFSLEQHRLQLDQVLQLYNEQVRVSLQQ
EMSIQNLTLLNLRTTDALIQKVEEVASLKEEVASLKEEVASLHVELQRKQGDIEAAQQFA
VMVLETNESLIHRPPRMQQEMNLHISSNQSDAPGSGNEASSVVRTAAETTKIDLICKVCN
FGLACMLLLPCQHLCACNPCGVRLAACPICGAVKGGAVEARFVEK
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctcaatagccattctgaacatgccgatcaacctcaggggcaacaagcaaat
ggccttcctttggatggcataaatccggtgccgtttggcttctcccttgagcagcacagg
ctgcagttggatcaggtcctccaactctacaacgagcaggttcgggtgtctctgcagcag
gaaatgtctatacagaacttaactctactgaaccttcggacaactgatgcgctgattcag
aaggttgaagaggtagccagcttgaaagaagaggtagccagcttgaaagaagaggtagcc
agcttgcatgtagagttgcagaggaagcaaggagatatagaagctgcacagcagtttgct
gtgatggttcttgaaacgaatgagtcacttatccacaggcctccccggatgcagcaggaa
atgaacttacatatctcatctaaccagtcagatgctccaggctctggaaatgaagcatcg
agcgtggtgagaaccgcagcagagacaaccaagatcgatctcatctgcaaggtttgcaac
tttggtcttgcttgtatgctgttactgccgtgccagcacctctgcgcatgcaatccatgc
ggagtccgtctcgcggcatgccctatctgcggtgctgtgaagggtggtgcggtcgaggcc
cgatttgtcgagaagtaa
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