Setaria viridis (green foxtail): 117842136
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Entry
117842136 CDS
T07951
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117842136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117842136
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
117842136
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
117842136
NCBI-ProteinID:
XP_034578386
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Position
2:complement(38137170..38145403)
Genome browser
AA seq
1223 aa
AA seq
DB search
MQTIKRLPRSVHSSLRSSIVLSDLPRVVEELIYNSIDANASKIDIAINIRACYVKVEDDG
CGITRDELVLLGEKYTTSKFHNVMGDGELSPRSFGLNGGALASLSDISVVEIRTKARGRP
NAYCKIIKGSKCLHLGIDDKREIVGTTVVVRELFYNQPVRRKQIQSSEKRELHHVKKCVL
QIALIHPQISLRLLDNDSEDELLYTAPSSSPLPLISKKFGDDVSRCLHEIAASDQSWVLS
GHVSGPSDVFHTKDFQYLYINSRFVNRNPIHNMLNNLASSFHSSVTRRNEEIDVQSRKRQ
KTDIYPAFLLNFCCSRSSYDLHFEPTKTIVEFKDWQTVLLFFEQTVTNYWKKHALQSPKA
DRVCAGDTCVPRKNDVKLNKGLLRHHNVQNNEEYADFQNTKQKNAVRDTNSDDMSATRAP
KDSHCFSFDTEPSIQHVSFSGRITNSPWPNDNVVSIDYKLGYKVMHSPERLNYRWLEDGP
SQLDDDVSSVNPTGWKRQRTEGIFHECAYSGNFGMLEDVPTEGFLAHKQKSELIGSEVEM
QEPCFGSLNRPNKMSSELVQNQTNIKAHTSGWDGLYVEFDKSNGDCLVNEATDTITDISY
PEMWKLNDGFYHDDGNTSRGFCRVLRKCSTNEKLGTAAGCIEGLETDTVSQINFPDIHAV
WNSDLMDRSSIEDTFRHFPHLSSLADTPCSYARTGLTLDKKSDKNFGSWSCENIDSSIRI
ALDRFSNVSSITCEGAKYLDNFDYEIQPLNYFNNDCSSTDQFGSEDDLIMWKPKFDTRFS
ADISPERSDNGCHLNVPSSNMANDSTLTQDLLNQHNLGLDQRSRLSKGSRSRSHSAPPFY
RGKQKFSRLNEPLSKLATDGDKGICINNPKDNASRPVDVLPMSSTQPVPVTDGSEFPDLN
FSSNGFVKMFKDACSDRLEDSAARITKWRDDSCQHTASNLPHGPFGCYDDVLSISSGTLH
LSCTSLVPECVDRNCFEEARVLLQLDKKFIPVISGNTILLVDQHAADERIRLEELRRKVL
SEEGHVVTYLDSEEELSLPETGFQLFQKYAEQIQKWGWIISSDSNSSESFKKNMNILRRQ
TRLVTLVAVPCILGVNLTGKDLMEFIQQLDETDGSSAMPPAVLRILNFKACRGAIMFGDP
LLPSECCLIIEELKATSLCFQCAHGRPTTVPIVNVASLHDELARHQMLSGRQAESWHGLA
HQGPSLERAQMRLKQLRNLRRGL
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccataaagcgcttgccgaggagtgtccatagctccctgcgttcaagcattgtt
ctgtctgacctgccaagggttgttgaggagttgatatataacagcattgatgcgaatgcg
agcaagattgacattgcaataaacatcagagcatgttatgtaaaagtggaagatgatggt
tgtggtattacacgagatgaattggttctcttgggagaaaaatatacaacatccaaattt
cataatgtgatgggcgatggggaacttagtcctagaagttttggactaaatggaggagca
ctcgcatcactttctgatatctctgtggttgaaatcaggacgaaagcccgtgggagacca
aatgcatattgcaagataataaagggatctaaatgcctacatctgggaatagatgacaag
agggaaattgttggcaccacagttgttgttcgggagcttttttacaatcaaccagtacgg
aggaaacaaatacaatctagtgagaaaagagaattacatcatgtgaagaagtgtgtcctg
caaattgcgcttattcatccgcagatttcactcagactccttgacaatgacagcgaagat
gaattgctatacacagctccttcatcatcccctttgcctcttatatcaaaaaaattcggg
gatgatgtctccagatgtctccatgagatagctgcctctgaccagagctgggttctttca
gggcacgtatctggaccttcagatgtgtttcatacgaaggatttccaatacttgtacatc
aactcaagattcgtgaatagaaacccaattcataatatgctcaataatctggcatctagt
tttcactcttccgttacaaggaggaatgaagaaattgatgttcagagcaggaagaggcag
aagaccgatatctaccctgcttttctactgaatttttgctgttctagatctagctacgat
ctacattttgagcctacaaaaaccattgtggaattcaaggattggcaaactgtcttgctt
ttctttgaacaaactgtcacaaactactggaagaagcatgcactgcaatcaccaaaagct
gacagagtttgtgctggtgatacctgtgtgcctaggaaaaatgatgtgaaattgaataag
ggactcctaaggcatcataatgtgcagaacaatgaagagtatgctgacttccaaaacact
aagcagaagaatgcagtcagagatacaaacagtgatgatatgagtgccacaagagcacca
aaggactcacactgcttttcttttgatacggagccatccatacaacatgtctccttttct
ggaaggatcactaattcaccctggcccaatgacaatgttgtcagtattgattacaagtta
gggtataaggtaatgcattctcctgaaagactcaattatcggtggttagaggatggtccg
tcccagttagatgatgatgtttcaagtgttaacccaactggttggaaaaggcaaaggaca
gaaggtatattccatgagtgtgcatattctggtaattttggaatgttggaagatgtacca
actgaagggtttttagctcacaaacaaaaatctgagttgattggttcagaagttgaaatg
caagaaccttgcttcgggtctctcaataggccaaataaaatgagctccgagttggtgcaa
aatcaaaccaacataaaggcacacacatctggctgggatggattatatgttgagtttgat
aaatcaaatggagattgcctagtcaatgaagctacagatacaatcacagatatttcttac
cctgagatgtggaagttgaatgatggattttatcatgatgatggtaacacctccagaggc
ttctgtagagttttgagaaagtgcagcaccaatgagaagttagggactgcagctggatgt
attgaaggacttgagactgatactgttagccagataaacttccctgatattcatgctgtg
tggaacagtgacttgatggataggtcttccattgaggatactttccgtcattttcctcat
ctatcctcgttggctgatacaccttgcagttatgcaaggactggcttgacacttgacaag
aaatcagataaaaactttggttcttggagctgtgaaaatattgacagcagtattagaatt
gctctggacaggtttagcaatgtgtcatcaataacatgtgaaggagctaaatatttggat
aactttgactatgaaatacagccgcttaattacttcaataatgattgcagttcaaccgac
cagtttggttctgaagatgacctgataatgtggaaaccaaaatttgacacgagattttca
gctgatatttctcctgagagaagtgataatggttgccatttgaatgtcccttcttccaat
atggcaaatgacagcacacttactcaagatcttctgaatcaacacaaccttggactggac
cagagatccaggctttccaagggcagtagatctaggagtcattctgctccaccattttat
agagggaaacagaaattctctagattaaatgagccactgagcaaattggccacagatggt
gataaaggcatctgcattaacaaccccaaagacaatgcatctagacctgtggatgtcttg
cctatgagttcaacccagcctgttccagtgactgatggcagtgaatttccagacttaaat
ttcagctcgaatggatttgtgaaaatgtttaaagatgcatgttctgacaggcttgaagat
tcagctgctcgaataactaaatggcgagatgactcttgccagcatacagcttcgaacttg
ccacatggtccttttggatgctatgatgatgtactgagcatttcttctgggaccttacat
ctctcttgcacctcgctagttcctgaatgtgttgacaggaactgctttgaggaggcaagg
gttttgttgcagctggacaagaaatttattcccgtcatatctgggaacactatcctcctt
gttgatcagcatgcagctgatgaaaggatacgtctggaggagcttcgtagaaaggtttta
tcagaagaaggccatgtcgtcacttacttggactctgaggaggaattatctctccctgag
actggttttcaattgttccagaagtatgctgaacaaattcagaaatggggctggatcatc
agcagtgatagcaattcctctgaatcattcaagaagaacatgaacattctgaggagacaa
acccgtctcgttactcttgttgctgttccatgtattttgggtgtcaatttgacagggaaa
gatcttatggagtttatccagcagcttgatgagactgatgggtcatcagctatgccccca
gcagttctccgtattcttaacttcaaagcttgcagaggggcgatcatgtttggtgacccc
ttgctaccatccgaatgctgtctgattattgaagaactgaaagcaacatctctatgcttc
cagtgtgctcatgggcgcccgaccacggtgcctattgtgaacgtcgcatccctccatgat
gagctggcgaggcaccaaatgctgagcggaaggcaggcagagtcctggcacggcttggcg
caccaagggcccagccttgagcgcgctcagatgcgcctcaaacaactgaggaacctacgc
cgtggcctatag
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integrated database retrieval system
