Setaria viridis (green foxtail): 117842151
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Entry
117842151 CDS
T07951
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00730
Thiamine metabolism
svs00900
Terpenoid backbone biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
117842151
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117842151
Enzymes [BR:
svs01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
117842151
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
Transketolase_N
TPP_enzyme_C
Transketolase_C_1
Motif
Other DBs
NCBI-GeneID:
117842151
NCBI-ProteinID:
XP_034578406
LinkDB
All DBs
Position
2:5753023..5756172
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AA seq
721 aa
AA seq
DB search
MSPMALQASTPSAFRASPATAHASCRRQVRRQFQVRASAAAKSSSVGADDGKMMVPKEEP
SSSPWKVDFSGEKPATPLLDTVNYPAHMKNLSTLELEQLAAELRAEVVHTVSKTGGHLSS
SLGVVELAVALHHVFDTPDDKIIWDVGHQAYPHKILTGRRSRMHTLRQTSGLAGFPKRDE
SPHDAFGAGHSSTSISAALGMAVARDLLGRNNHVISVIGDGAMTAGQAYEAMNNSGYLDA
NMIVVLNDNKQVSLPTATLDGPSKPVGALSRALTRLQSSTKLRRLREAAKAVTKQIGGPA
HGVAAKVDEYARGMISASGSTLFEELGLYYIGPVDGHNVEDLVTIFEKVKAMPAPGPVLI
HIVTEKGKGYPPAEAAADRMHGVVKFDPATGRQFKSKSPTLPYTQYFAESLIREAEVDDK
VVAIHAAMGGGTGLNHFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR
GYDQVVHDVDLQRLPVRFALDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADESELM
HMVATATAIDDRPSCFRFPRGNGIGAALPPGNKGSPLEIGKGRVLVGGNRVALLGYGSMV
QACLKAAEALKEHNVYITVADARFCKPLDTGLIRELAAEHEVLITAEEGSIGGFGSHVAH
YLSLAGLLDGNLKLRSMFLPDRYIDHGAPQDQMEEAGLTPRHIAATVLSLLGRPLEAMQL
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaatggcgctccaggcatccacgccttccgcgttccgcgcgtccccggccacc
gcccacgcttcctgccggcggcaggtacggcggcagttccaggtgcgcgcgagcgcggcg
gcgaagagcagcagcgtcggcgccgacgacgggaagatgatggtcccgaaggaagagccg
agctcgagcccctggaaggtggacttctccggcgagaagccggcgacgccgctgctggac
acggtgaactacccggcccacatgaagaacctctccaccctggagctggagcagctggcg
gcggagctccgcgcggaggtggtgcacacggtgtccaagaccggcggccacctgagctcc
agcctgggcgtggtggagctcgccgtggcgctccaccacgtgttcgacacccccgacgac
aagatcatctgggacgtcgggcaccaggcgtacccgcacaagatcctcaccggccgccgc
tcccggatgcacaccctccggcagacctccggcctggcggggttcccgaagcgcgacgag
agcccgcacgacgcgttcggcgccggccacagctccaccagcatctcggcggcgctgggc
atggcggtggcgcgggacctcctcggccgcaacaaccacgtcatctcagtcatcggcgac
ggggccatgaccgccggccaggcctacgaggccatgaacaactccggctacctcgacgcc
aacatgatcgtcgtcctcaacgacaacaagcaggtgtccctccccaccgccacgctcgac
gggccctccaagccagtcggcgcgctcagccgcgcgctcaccaggctccagtccagcacc
aagctccgccgcctccgcgaggccgccaaggccgtcaccaagcagatcggcggtccggcg
cacggcgtcgccgccaaggtcgacgagtacgctcgcggcatgatctccgcctcgggatcc
acgctcttcgaggagctcggcctctactacatcggccccgtcgacggccacaacgtcgag
gatctcgtcaccatcttcgagaaggtgaaggccatgccggcgccggggcccgtgctcatc
cacatcgtgacggagaagggcaaggggtacccgccggcggaggcggcggccgaccggatg
cacggtgtcgtcaagttcgatccggcgacagggaggcagttcaaatctaagtccccaacg
ctgccttacacgcagtacttcgccgagtcgctgatccgggaggcagaggtcgacgacaag
gtggtggccatccacgccgccatgggcggcggcacggggctcaaccacttccagaagcgg
ttcccggagcggtgcttcgacgtcggcatcgccgagcagcacgccgtgacgttcgccgcc
gggctcgccgccgaggggctcaagcctttttgcgccatctactcctccttcctccagcgg
gggtacgaccaggtggtccacgacgtggaccttcagaggctgccggtgcggttcgcgctc
gaccgggcggggctcgtcggcgctgacggccccacgcactgcggcgccttcgacgtcgcc
tacatggcgtgcctcccgaacatggtggtcatggcaccggccgacgagtccgagctgatg
cacatggtcgccaccgccaccgccatcgacgaccggcccagctgcttccgcttcccgcgg
ggcaacggcatcggcgccgccctcccgccggggaacaagggctcgccgctggagatcggc
aagggccgggtgctcgtcggcggcaaccgggtggcgctcctcggatacgggtccatggtt
caggcctgcctcaaggccgccgaggcgctcaaggagcacaacgtgtacatcaccgtcgcc
gacgcgcggttctgcaagccgctggacacggggctgatccgggagctcgccgccgagcac
gaggtgctcatcaccgccgaggagggctccatcggcgggttcggctcccacgtcgcgcac
tacctcagcctcgccggcctactcgacgggaacctcaaactgagatccatgttcctgccg
gaccggtacatcgaccacggcgcgccgcaggaccagatggaggaggcggggctgacgcca
cggcacatcgccgccaccgtgctgtccctgctggggaggccattggaggcaatgcagctc
aagtga
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