Setaria viridis (green foxtail): 117842257
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Entry
117842257 CDS
T07951
Name
(RefSeq) peroxisome biogenesis factor 10 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117842257
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117842257
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117842257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
Prok-RING_4
RING_XB3-XBAT31
zf-rbx1
Zn_ribbon_6
zf-RING_10
zf-RING_4
zf-P11
U-box
zf-Nse
Sina_RING
zf-RING_6
zf-RING_11
TRAF3_RING
DZR
Motif
Other DBs
NCBI-GeneID:
117842257
NCBI-ProteinID:
XP_034578531
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All DBs
Position
2:complement(35263615..35267137)
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AA seq
216 aa
AA seq
DB search
MSTVSSTRRAPRRLSQDGSADKVVVNLEASSPVVGSSPSFPVAGSRQGVSATVAGAQNSP
IDVEAIEDEVQAISPSRVPPPRRNRRTRRQPVTVVDLEVEGSQQVIYSVMGVSYDDASVS
SDLPTGNKRQRVVHCLSQNRGEGSSFQANKEVPKEPTFTCPICWNKMEEPATTPCGHIFC
NTCIKQAIKVQKRCPTCRKGLRATSVHRIYLPSTAS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgtcagcagcacaaggcgtgccccgaggagactgtcgcaagatgggtctgct
gataaagtagtggtgaacttggaagcaagctccccagtggtgggaagttcaccgagcttc
ccagtggcgggaagccgtcagggagtatcagccactgttgctggcgcacaaaactcacct
attgatgtggaagccattgaagatgaagtgcaggcaatatcgccatcacgagtaccccct
ccaaggagaaacaggagaaccaggaggcaacctgtaacagtggttgacttggaggttgag
ggtagccagcaagttatttattcagtcatgggtgtttcatatgacgatgcatctgtgtct
tctgatcttcctacagggaacaagcgccagagggttgtacattgcctctctcaaaatagg
ggagaagggtccagctttcaggcaaataaggaggtccccaaggaaccaacttttacctgc
ccgatatgttggaataagatggaggagcccgccacaacaccttgtggccatatcttctgc
aacacgtgcattaagcaagccatcaaggttcagaagagatgtcctacgtgcaggaagggc
ctgagagcaactagcgtccatcgtatttatcttccaagcaccgctagttaa
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