Setaria viridis (green foxtail): 117842258
Help
Entry
117842258 CDS
T07951
Name
(RefSeq) 3-ketoacyl-CoA synthase 17
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00062
Fatty acid elongation
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs04626
Plant-pathogen interaction
Module
svs_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
117842258
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117842258
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
117842258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
AAA_lid_At3g28540
Motif
Other DBs
NCBI-GeneID:
117842258
NCBI-ProteinID:
XP_034578535
LinkDB
All DBs
Position
2:complement(26708511..26710214)
Genome browser
AA seq
468 aa
AA seq
DB search
MSSSTSSTAAAAAAAMASLCTLPLPLLVALVVSGLAFLATVLRRVLRRQRPVYLLNYSCH
LPDVDRQVNLEVCEYFGLKCRRYSDDIADFMRLIYSKSGLGQETFAPPFIFSGKFEKTLA
FAVQEAEEGLFAVVGQLLAKADVTPADISVLVVACSMFSPMPSLASMIAHRFKMRPDVKA
YSVAGMGCSAGTVGIDTAARSLRCQRRPGYALVVVTENTSLNWYFGENKHMLVTNCIFRV
GTAAALVTDVPSRRADAKYELVRTLRTHHGADDAAFHAATQMEDEKGNLGVALTKDLVRV
AGAALRRHITALGPRVLPVAEMLRYGWRVARAHAAGNSKAAAAAVPDFQRAFEHMCIHSG
GKAVIDSVARLMGFGPEVVEPARATLHRFGNTSSSLVFYELAYFEAKRRVRAGDRLWMLA
FGTGFKACSNVWRALRDCGPDADNPWNGCVHRYPMPLPPPSRTHKHAA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgacgtcgagcacggccgccgcggcggcagcggccatggcgtcgctctgc
accctccctctcccgctgctcgttgctctcgtcgtatcgggtctcgccttcctggccacc
gtcctccggcgcgtcctgcgtcggcagcggccggtgtacctgctcaactacagctgccac
ctccccgacgtggaccggcaggtgaacctggaggtgtgcgagtacttcggcctcaagtgc
cggcgctactccgacgacatcgccgacttcatgcgcctcatctacagcaagtccggcctc
gggcaggagaccttcgcgccgcccttcatcttctcgggcaagttcgagaagacgctggcg
tttgcggtgcaggaggccgaggagggcctgttcgccgtggtcgggcagctcctggcgaaa
gccgacgtgacccccgccgacatcagcgtcctcgtcgtggcctgctccatgttctccccg
atgccgtcgctggcgtccatgatcgcgcaccggttcaagatgcggcccgacgtgaaggcc
tacagcgtggccgggatggggtgcagcgccggcacggtgggcatcgacacggcggcgcgg
tcgctccgttgccagcgccggcccgggtacgcgctggtggtggtgacggagaacaccagc
ctcaactggtacttcggcgagaacaagcacatgctggtgaccaactgcatcttccgcgtc
ggcaccgcggcggcgctggtgaccgacgtcccctcccgccgcgccgacgccaagtacgag
ctggtgcgcaccctccggacgcaccacggcgccgacgacgcggcgttccacgcggcgacg
cagatggaggacgagaagggaaacctcggcgtggcgctgaccaaggacctggtccgcgtc
gccggcgccgcgctccggcggcacatcacggcgctgggcccccgcgtgctccccgtcgcc
gagatgctccggtatgggtggcgcgtggcgcgggcgcacgccgccgggaactcgaaggcg
gcggcggcggcggtgcccgacttccagcgggcgttcgagcacatgtgcatccactcgggc
gggaaggcggtgatcgactcggtggcgaggctgatggggttcggtccggaggtggtggag
ccggcgcgggcgacgctgcaccggttcgggaacacgtcgagcagcctggtgttctacgag
ctggcctacttcgaggccaagcggcgggtgcgcgccggcgaccggctgtggatgctggcg
ttcgggacggggttcaaggcgtgcagcaacgtgtggcgcgcgctcagggactgcggaccc
gacgccgacaacccgtggaatgggtgcgtccaccgataccccatgccgctcccgccgccg
tccaggacgcacaagcatgccgcttag
DBGET
integrated database retrieval system