Setaria viridis (green foxtail): 117842446
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Entry
117842446 CDS
T07951
Name
(RefSeq) E3 ubiquitin-protein ligase AIP2
KO
K16274
E3 ubiquitin-protein ligase AIP2 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117842446
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117842446
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117842446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Prok-RING_4
zf-RING_UBOX
zf-RING-like
zf-RING_16
At5g52880_ARM
PHD
zf-HC5HC2H
Pesticin_RB
Med19
HBS1_N
Zn_ribbon_FGT1_1
Motif
Other DBs
NCBI-GeneID:
117842446
NCBI-ProteinID:
XP_034578801
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All DBs
Position
2:complement(30518761..30522497)
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AA seq
324 aa
AA seq
DB search
MSTTATDEAALEARLQALRQRLGKKQHFEEAVANLAAVVRDRYAGASPALRKSMYSTVCR
VATVLQTRYTAPGFWRAGLNLFVGAEKLVTNPAEKEQLKSCISRAREHLDEKENEDSMPS
NREADTRFLFEGHLTVGQEPPPPAWLVADNLARELSILTESSGDQDGNNNRRESRAEDIA
PAIMNFLETISGDRDLETALEESLQGIIEHPPRAPPASKEVVANLPVLTVTEEVIARLGS
ETECAVCRENLVVGDKMQELPCKHLFHPPCLKPWLDENNSCPICRHELRTDDHVYESRKE
REKEEEEDRRGAANAVRGGEFMYI
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgacggcgacggacgaggcggcgttggaggcgcgcctccaggcgctgcggcag
aggctcgggaagaagcagcacttcgaggaggcagtcgccaacctcgccgccgtggtccga
gaccgctacgccggcgcctcccccgccctccgcaaatcgatgtactccactgtttgccgt
gttgcaacagtgctccagactagatatacagctcctggattttggcgtgctggtctgaac
ctctttgtcggagcagagaagctggtaactaatcctgctgaaaaggagcagttgaagagc
tgtatttcgagggctcgggagcatcttgatgaaaaagaaaatgaggattctatgccaagc
aacagggaagcagacaccagatttctttttgaagggcaccttactgtaggacaggaacct
ccacctccagcatggcttgttgctgataatttagcacgggaattgagcatactaactgaa
tcctctggggatcaagatgggaacaacaataggagggagtctagagccgaggatattgca
cctgctataatgaacttcttagaaaccatatcaggagacagggatctagaaactgccttg
gaagaatcactgcagggtatcattgagcatccacccagggcacccccagcttcaaaggaa
gttgttgccaatttacctgtcctaacagttactgaagaagtcattgccagattgggtagt
gagacggagtgtgctgtttgccgtgaaaacttggttgtcggcgacaaaatgcaggagctg
ccgtgcaagcatcttttccatcctccgtgcctgaagccatggctggacgagaacaactcg
tgcccgatctgccggcatgagctgaggacggatgaccacgtgtacgagagcaggaaggag
cgcgaaaaggaagaggaggaagacaggaggggagcggcgaatgctgttaggggtggggaa
ttcatgtatatctga
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integrated database retrieval system