Setaria viridis (green foxtail): 117842497
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Entry
117842497 CDS
T07951
Name
(RefSeq) ABC transporter B family member 28
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117842497
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117842497
Transporters [BR:
svs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
117842497
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
ABC_ATPase
AAA_21
AAA
AAA_30
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_5
AAA_14
AAA_25
AAA_33
AAA_28
nSTAND3
Rad17
SRP54
AAA_7
Motif
Other DBs
NCBI-GeneID:
117842497
NCBI-ProteinID:
XP_034578856
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Position
2:13725142..13744626
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AA seq
706 aa
AA seq
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MAISTWSARLLLTPAPSRAVPLPAPPRPAENPTRAPSISVSRRRLHLARPRPPRAYISAP
APGPEAAYAPPSLDAAAAAADVAAAISSSDAVTWAGVWALLSRHRARIAVCLAALVACTT
CTLSMPLFSGRFFETLIGRGKEPLWRLLSKIAVLYTLEPIFTIMFVINMTVIWEQVMARL
RSQIFRRILIQKMVFFDRHKVGELTGLLTSDLGSLKNLVSDNISRDRGLRALSEITGTLC
ILFTLSTELAPVLGLLMVSVSGLVALFKRSTVPTFKSYGIVQAQISDCASETFSAIRTVR
SFGGEKRQISFFDNLARAYQNSGTKLGVLKSANESLTRVVVYVSLMALYVLGGSKVNAGK
LSVGTMASFIGYTFTLTFAVQGAVNTLGDLRSTLASIERINSILSAKDIDDSLAYGLAKE
LDSKEIGDSNGGLYENGSVNKHFMSELKSSSSCSNLAWSGDIHLKDVHFSYPLRSDVEIL
NGLDLMIECGKVTALVGPSGAGKSTVVQLLARYYEPTQGCITVAGEDIRIFDKREWSRVV
SLVNQDPVLFSVSVGENIAYGLPDDVVSKDDIIKAAKAANAHEFIISLPQGYDTLVGERG
SLLSGGQRQRIAIARALLKNAPILILDEATSALDATSERLVQEALNLLMKGRTSLVIAHR
LSTVQNAHRIAVCSEGKITELGTHAELVAKGGSYASLVGTQRLAFE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctccacctggagcgcgcgcctcctcctcacccctgctccctcccgcgccgtc
ccactcccggctccccctcgccctgccgagaacccgacccgcgccccctccatttcagtc
tcccgccgccgcctccacctcgcgcgcccgcgcccgccgcgggcctacatctccgcgccg
gcgccgggccctgaggccgcctacgcgccgccctccctcgacgcggcggcggcggcggcc
gacgtcgccgccgcgatctcgtcctccgacgccgtcacctgggcgggcgtctgggcgctc
ctctcgcgccacagggcccgcatcgcggtctgcctcgcggcgctcgtcgcctgcaccacc
tgcaccctctccatgccgcttttctcaggcaggttcttcgagacgctgattgggcggggg
aaagagccactgtggaggctcctgtccaagatagccgtgctgtacacgctggagcccatc
ttcacaatcatgtttgtgatcaacatgaccgtcatctgggagcaggttatggccaggttg
cggagccagatatttcggaggattctcatccaaaagatggtgttttttgatcgccacaag
gttggtgaattgaccggcttgttgacatctgatttgggttccttgaagaatcttgtaagt
gacaacatatccagagaccggggactaagggcactctctgagatcaccggtacactttgt
atacttttcacactatctactgagctagctcctgttctcgggctcctaatggtctccgtc
tccgggctagttgctcttttcaagaggtcaactgttcccacttttaaatcttatggaatc
gtgcaagcacaaatatcagattgtgcatcagagacattctcagctattcgtacagttagg
tcttttggcggtgaaaaacgtcaaatttctttctttgacaatttggcacgtgcttaccaa
aatagtggcacaaaattaggagtgctgaaatctgctaatgaatcattaactcgtgtagtg
gtttatgtatccctaatggcgctttatgttcttggtggaagcaaggtcaatgcgggaaaa
ttgtcagttggaaccatggcatcttttattggttacaccttcacgttaacctttgctgtt
caaggagctgttaatacccttggtgatctacgcagcacactggcttctatagagagaata
aattctattctgtcagcaaaggacattgatgattcacttgcatatggtttagccaaagaa
ctcgatagcaaagagattggagattccaatggtggactgtatgaaaatggatctgttaac
aaacatttcatgtcagaactgaaatcatcgagtagctgtagtaatctagcctggtctggt
gacattcatctgaaagatgtccatttctcttatccactgagatctgatgtggagattttg
aatggccttgatcttatgattgagtgtgggaaggtcacagcacttgtagggcctagtggt
gctgggaaaagcactgtggtgcaacttcttgcacggtattatgagccaactcaaggctgc
atcactgtggcaggagaagacatccgcatttttgacaaaagagaatggtctcgagtggta
tctctagtaaatcaggacccagtcctattctcggtgtctgttggagaaaatattgcttat
ggtctcccagatgacgttgtctccaaggatgatataataaaagctgctaaagctgccaat
gctcatgaatttatcatttctcttccacaggggtatgacactcttgttggtgaacgaggc
agtctcctaagtgggggacagagacagagaattgcaattgcacgagcccttctgaaaaat
gctcctattctaatacttgatgaggctactagtgcactggacgcgacaagtgagcggctt
gtgcaggaagctctcaatcttttgatgaagggaaggacttctctggtgattgcccacagg
ctaagcactgtgcagaatgcacatcgaattgctgtttgctcagagggcaagataactgaa
ctggggacacacgccgaactggttgctaagggaggcagttacgcatcacttgtcgggaca
caaaggcttgcttttgagtaa
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