Setaria viridis (green foxtail): 117842524
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Entry
117842524 CDS
T07951
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117842524
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svs01009
]
117842524
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117842524
03036 Chromosome and associated proteins [BR:
svs03036
]
117842524
Protein phosphatases and associated proteins [BR:
svs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117842524
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117842524
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117842524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Cmc1
Motif
Other DBs
NCBI-GeneID:
117842524
NCBI-ProteinID:
XP_034578889
LinkDB
All DBs
Position
2:complement(37571704..37576674)
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AA seq
465 aa
AA seq
DB search
MGAAAAEVVAPRPPSGKRRSTTLRFLFELEKPDGLLPGTAKLPPPSPEPEADSLIDKIAS
CHRSFTFAGAGECEAERDAKRERLVEVLGAVRSAGTAGSNKGLPLDHRVMAALLRMVAAN
IFRSMPPSAYPPLPPDGLDEDAPAAVLAPAWPHLQVVYDILLSVVAAADARALRHHVDRA
FLSSLLALFASEDPRERDRLKTAYHQLYSKLTCERAFMRRSMATALLRLAYEAPPGERPC
GAAELLEICGSIINGFAVPLKEEHREFLTRVLMPLHRTRWAHTYHRQLAYCVLQFVHKEP
GLAGAVVTGILRHWPVTNCQKEVLLIEELEDILQVLEPEQFQKLAVPVCSRIARCVSSCS
SQVAERALYVWNNVRFLDLATSSPGVMEKILPAFVASVEGNLERHWSKCVQQVTASVKAL
LEEVAPDLYARCAADLAARRSEAEAAAAVRAARWRKLDAAAAAAK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgccgcggcggaggtggtggcgccgaggccaccgtcgggcaagaggaggtcg
accacgctgaggttcctcttcgagctcgagaagccggacggcctgctgcccggcacggcc
aagctcccaccgccgtcgccggagcccgaggccgacagcctgattgacaagatcgcctcg
tgccaccgctcgttcacgttcgccggcgcgggcgagtgcgaggccgagcgggacgcgaag
cgggagcgcctggtggaagtgctcggtgccgtgcggtcggccgggacggccgggagcaac
aaggggcttccgctggaccaccgcgtgatggcggcgctgctgaggatggtcgccgccaac
atcttccgttcaatgccgccgtcagcgtacccgccgctgccgcccgacggcctcgacgag
gacgcgccggcggcggtgctggccccggcgtggccgcacctccaggtggtctacgacatc
ctcctctccgtggtcgccgccgcggacgccagggcgctgcgccaccacgtggaccgcgcc
ttcctctcgtccctcctcgcgctgttcgcctccgaggacccccgggagcgggaccggctc
aagaccgcgtaccaccagctctactccaagctcacctgcgagcgcgccttcatgcggcgc
tccatggccaccgcgctcctgcggctcgcctacgaggctcccccgggcgagcgcccctgc
ggcgccgccgagctgctggagatctgcggcagcatcatcaacggcttcgccgtgccgctc
aaggaggagcaccgggagttcctgacgcgcgtgctgatgccgctgcaccggacgcggtgg
gcgcacacgtaccaccgccagctcgcctactgcgtgctccagttcgtgcacaaggagccc
gggctcgccggcgccgtcgtcacggggatcctgcgccactggcccgtcaccaactgccag
aaggaggtgctgctcatcgaggagctcgaggatattctccaggtgctcgagccagagcag
ttccagaagctggccgtgcccgtctgctcgcggatcgcccgctgtgtcagtagctgcagc
tctcaggtggccgagagggcgctgtacgtgtggaacaacgtgcggttcctggacctggcg
acgtcgtcgccgggcgtgatggagaagatcctgccggcgttcgtggcgagcgtggagggc
aacctggagcggcactggagcaagtgcgtgcagcaggtgacggccagcgtcaaggccctg
ctggaggaggtggcgcccgacctctacgcccggtgcgccgccgacctcgccgcgcggcgc
tccgaggccgaggccgccgccgccgtgcgcgccgcccgttggcggaagctcgacgctgcc
gccgccgccgccaaatag
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