Setaria viridis (green foxtail): 117842525 Help Entry 117842525         CDS       T07951                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism svs  Setaria viridis (green foxtail) Pathway svs03430   Mismatch repair Brite KEGG Orthology (KO) [BR:svs00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     117842525  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:svs03400]     117842525 DNA repair and recombination proteins [BR:svs03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      117842525 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor AAA_22 Tudor_KDM3B LBR_tudor nSTAND_NTPase5 Cadherin_2 Motif Other DBs NCBI-GeneID:  117842525 NCBI-ProteinID:  XP_034578890 LinkDB All DBs Position 2:28907001..28915792 Genome browser AA seq 1312 aa AA seqDB search MASRRASNGRSPLVRKQSQITAFFSSSPTPSPSPSTPNAGAPKPSPSPLNPSAARRSTLA AASPSPPKQPMPTPPPAQEEKRGKRDKKERDAAAPVAVAASPAAEVVGRRLRVYWPLDDA WYEGRVEAYDAASGKHCVKYDDGDEEQVDLGKERFEWAAAGEESTPTPARKLRRLRRMSD TAVAKSPAVAEDEEDGAGDSTEHEDWKKDTLAEDDLEEEVELDDEEEVVAVSSRKGKTRN SLPVSGSAPSTLGFGLISASGSTISKKRKKVDVGSLDCAKRFSFEAVNTSGKVDPEMRIS CGQKEQTTGNANTALTGEAAERFAQRDVEKFKFLGEGRKDAKGRRPGSPGYDPRTLLLPS QFLKGLTGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAKDLDLQYMKGEQPHCG FPEKNLSVNLEKLAKKGYRVLVVEQTETPEQLELRRKAMGIKDKVVRREICAVVTKGTLT EGENLLANPDPLYLLSVTESHQQSSKKSEDTCTIGVCIVDVSTNKFIVGQFQDDPERHGL CSILSEMRPVEIIKPGKMLSPETEKALKNNTREPLINELLPSAEFWDAEKTIHEIKQYYS SADKQNNVNDVQDSMDCLPNLLNDLIGAGDKIYALSALGGSLFYLRQTLLDEKILLCAEF EPLACSGLINNIRKHMILDAAALENLELLENIRTGGLSGTLYAQLNHCVTGFGKRLLKRW IARPLYDRGAILRRQSAIATFKGVGHDYAVQFRKDLSRLPDMERLLARLFSSCDKNKRNS SVVLYEDASKRLLQQFTAALRGCQQMFHACSSISTLICTEESQLNDLLSPGTGLPDVSSI LDRFRDAFDWSDADSNGRVIPREGCDPEYDATCNAIQEIGSSLKEYLKKQRKLLRCASVD YVNVGKDMYLIEVPESLGGSVPGNYELQSTKKGFYRYWTPELKELISELSKAEAERESIL KGILQNLIQLFVEHHSEWRQLVSVVAELDVLISLSIASDYFEGASCRPTIKESNGPDDTP TFHARNLGHPILRSDSLGKGSFVPNDVKIGGPGNASFIVLTGPNMGGKSTLLRQVCLTII LAQIGADVPAENLELSLVDRIFVRMGARDHIMSGQSTFLVELMETASVLSSATKNSLVVL DELGRGTSTSDGQAIAASVLEYLVHQVQCLGLFSTHYHRLAVEHKDAKVSLCHMACEVGK GEGGLEEVTFLYRLTPGACPKSYGVNVARLAGIPASVLQRANEKSNDFEANYGKRHRMIK DKHASAQSEDKFSAIRDLFRIVNAWPCPDGQAASINMLREVQKLAKVQAVEG NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atggcgtcgcgccgagccagcaatggccgctcgccgctcgtgcggaagcagagccagatc accgccttcttctcctcctcccccaccccctcaccttccccgtccacgccgaacgccggc gcgcccaagccctcgccgtcgccgctgaaccccagcgcggcgcggaggtccacgctcgcc gcggcctccccttcccctcccaagcagccgatgccgacgccgccgccggcgcaggaagag aagagggggaagagggataagaaggagcgggatgctgccgctccggtggctgtggctgcg tcgccggcggcggaggtggtggggaggcggctgcgggtgtactggccgctggacgacgcg tggtacgaggggagggtagaggcctacgatgcggcctcaggcaagcactgtgtgaagtac gacgatggcgacgaggagcaggtcgacctcgggaaggagaggttcgagtgggccgccgca ggtgaggagtccaccccgacgcccgcgaggaagctgcggcgtcttcggcggatgtcggat acagcggttgcaaaatctccggctgtggcagaggatgaggaggatggcgcaggggattcc actgagcacgaggattggaagaaggatactctcgcggaggatgatttggaggaggaggtg gaactggatgacgaggaggaggttgttgcggtgagttcacgtaaggggaagacgaggaac tccttgccggtgtcaggttcagcgccatcgacattgggctttggcttgatatctgcgtcg gggtcaacaatttcgaagaagaggaaaaaggtggatgtgggttcattggattgtgctaaa aggttcagctttgaagcagttaatacctctggaaaagttgacccagaaatgcggatcagc tgtggccagaaggagcaaactacagggaatgctaatactgctcttactggggaggcagct gagcgctttgcacagcgtgatgtggaaaagtttaaattccttggagaagggcgcaaagac gcaaaaggcaggcgccctggaagcccgggctatgatccaagaacacttttattgccttcc cagttcttgaagggtttgacaggaggacagagacaatggtgggaatttaaatcacaacac atggacaaggttctgttcttcaagatgggaaaattctacgaactatttgagatggatgca catgttggggcaaaggaccttgatcttcagtacatgaagggtgaacaacctcactgtgga ttcccagagaagaatttatcagtgaacttggagaaactagctaagaagggttatcgagtt ctggttgtggagcagactgaaacacctgagcaacttgaactccggcgtaaggcgatgggt ataaaggacaaggttgtgaggcgtgaaatatgcgcagtggtcacaaaaggaacactgaca gaaggagagaacctactggcaaacccagatccattgtatctcctttctgtgactgaaagt caccaacaaagttcaaagaagagcgaagacacttgtaccattggtgtttgcatagttgat gtttctacaaacaaatttattgtaggacagttccaagacgatccagagcgccatgggtta tgttcaattttgtccgaaatgaggcctgtggaaatcatcaagcctggtaaaatgctgagt ccagaaactgagaaggcactaaagaacaacacaagggagcctttaataaatgagttgctt ccatccgcagaattctgggatgcagaaaagactattcatgagataaagcagtactacagc tcagcagataaacaaaacaatgtcaatgatgtacaggacagcatggactgtctgcccaac ctattaaatgacttaattggagcaggtgataaaatatatgcactttctgctcttggaggt tccttattttatttaaggcaaacccttctggatgagaaaatacttctatgtgctgagttt gagccccttgcatgctcggggctcatcaacaatatccgaaagcatatgatacttgatgca gcagcactggaaaatctagaacttttagaaaatatcagaactggtggcctgtcagggacc ctgtatgcacagttgaaccattgtgttactggatttgggaagaggctgcttaaacggtgg attgcaaggccattgtatgatcgcggagcaatactaaggcgtcaaagcgctattgctact ttcaagggagttggacatgactatgctgttcagtttcgtaaggatttgtctaggctacct gacatggagcgcttgcttgcacgtcttttctctagctgtgacaaaaacaagagaaattca tcagttgttctttatgaagacgcatcaaagagactgcttcaacagttcaccgctgctctt cgtggttgccagcagatgttccatgcatgttcttctattagtacattgatatgcacggag gagtctcaactaaatgatttgctctcaccaggcacagggctaccggatgtatcatctatt ttagaccgattcagagatgcatttgattggtcagatgcagacagcaatggtcgggtcatt ccccgtgaaggttgtgatcctgaatatgacgccacttgcaatgcaatacaggagatcgga tccagtctaaaagaatacctgaagaagcaacggaagcttttgcgatgtgcatcggttgat tatgttaatgttggaaaagatatgtacctaattgaagtgcctgagagcctgggaggttct gttcctggaaactatgagttgcagtctacaaaaaagggtttctataggtactggacgcca gaactgaaagaactaatatcagaactttcgaaggctgaggcagagagagaatcaatattg aaaggcattcttcagaatttgattcagctatttgttgagcatcacagcgagtggaggcaa ttggtttctgttgttgctgagcttgatgtcttaataagtctttctattgcaagtgattat tttgagggcgcaagttgccgtccaactatcaaagaatcaaatggcccagatgatactcct actttccacgccagaaatcttggacaccccattctacgaagtgattccttaggcaagggt tcttttgtaccgaatgatgttaagataggtgggccagggaatgccagctttattgttctt actggtccgaatatgggtggtaaatcaactcttttgcgccaagtttgtcttactattata ttggctcagattggagcagatgttcctgcagaaaaccttgaactttctcttgttgaccgt atctttgttcgaatgggagcaagggatcatattatgtccggccaaagtacattcttggtg gagctcatggaaactgcctcggtgctttcatcagctaccaagaattctctcgtggtttta gatgagcttgggcggggtacatcgacttctgatggacaagctattgcggcctctgttctg gaatatctagttcatcaggtgcagtgtctaggcttgttttctacacattaccataggtta gctgtggaacacaaggatgcgaaggtatctctatgtcatatggcatgcgaggtaggcaag ggagaaggaggtctggaggaagtgactttcctttatagattaactcctggtgcatgcccc aaaagctatggtgtaaacgttgctcgattggcaggaatacctgcttcggtgcttcagagg gctaacgagaagtcaaatgactttgaggccaattacgggaagcgacaccgtatgatcaaa gataagcatgccagtgcacagagtgaggataagttttctgccatcagggatttattccgc attgtgaatgcatggccttgtcctgatggtcaggcagcgagtataaacatgctccgtgaa gtgcagaagcttgccaaggtgcaggctgtggaaggttaa

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