Setaria viridis (green foxtail): 117842668
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Entry
117842668 CDS
T07951
Name
(RefSeq) probable small nuclear ribonucleoprotein G
KO
K11099
small nuclear ribonucleoprotein G
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117842668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117842668
03041 Spliceosome [BR:
svs03041
]
117842668
03032 DNA replication proteins [BR:
svs03032
]
117842668
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
117842668
Spliceosome [BR:
svs03041
]
Complex A
U1 snRNP components
Sm proteins
117842668
U2 snRNP components
117842668
Complex B
U1 snRNP components
117842668
U4/U6.U5 tri-snRNP components
117842668
Complex C
U2 snRNP components
117842668
DNA replication proteins [BR:
svs03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
117842668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
117842668
NCBI-ProteinID:
XP_034579058
LinkDB
All DBs
Position
2:complement(44140640..44143074)
Genome browser
AA seq
81 aa
AA seq
DB search
MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKNDIGMV
VIRGNSVVMIEALEPVAKAAQ
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atgagccggtcggggcagcctccggatctgaagaagtacatggacaagaagctccaaatc
aagctgaatgcaaaccgtgttgtcattggcacccttcgtggatttgatcagttcatgaat
ctggtcgtggacaacacagtggaggtcaacggaaacgacaagaacgacatcgggatggtg
gttatcagggggaacagtgttgtcatgattgaagccctcgagccggttgccaaggctgct
cagtga
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