Setaria viridis (green foxtail): 117842825
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Entry
117842825 CDS
T07951
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117842825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117842825
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
117842825
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GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-rbx1
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
Prok-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
117842825
NCBI-ProteinID:
XP_034579239
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Position
2:complement(44035591..44040238)
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AA seq
393 aa
AA seq
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MRAGTPAGDAGPSSHGGAGFGSGSRAPARPRRFPGAAQPEIMRAAEKDDSYAAHVTEACR
DAFRHLFGTRVAVAYQNEIKLLGQSLYYLLTTGSGQQTLGEEYCDISQVATLHGLPPTPA
RRILFILYQTTVPYLAERISSRIVARSIALNESQFDDHLESDNSSSGIAQSTTNNHVPSR
SLSVSALSRLRGRVHALWQWVLQKWPSMLPFAQDFIQLAIRTNLMLFYFEGLYYHLPKRA
AGIRYVFIGKPMNQRPRYQILGIFLLIQLCILGAERLRRSNISSIASSINQISSGSYPSS
TGRGVPVLNEDGHVISDICGGKAADVASHSEASSGKSKCTLCLGTRQNPTATTCGHVFCW
NCIMEWCNEKPECPLCRTPITHSSLICIYHSDF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcaggcacccccgccggcgatgcgggccccagctcccacggcggcgctggcttc
ggctccgggagccgtgcgcccgcgcgtccgcggaggttccccggggcggcgcagccggag
atcatgcgggcggcggagaaggacgacagctacgcagcgcacgtcaccgaggcctgccgc
gacgcgtttcgacacctcttcggtaccagggttgctgttgcctatcagaatgagataaaa
ttgcttggtcagtccctttattacttgctaacaactggttcaggtcagcaaacactcgga
gaagaatattgtgatatatctcaggttgcaaccttgcatggacttccacctacaccagct
aggcggatccttttcattttgtatcaaactactgtgccctatcttgctgaacgaatcagc
tccagaattgttgcacgtagtattgccctcaatgaatctcagtttgatgatcaccttgaa
agtgataattctagtagtggcattgcacagtccaccacaaataatcatgttccatcaaga
agcttgagtgtttctgctttatcaaggttgagaggacgagttcatgccttgtggcaatgg
gttcttcagaaatggccttcaatgctgccatttgctcaagactttatacagttggctatc
cgaacaaacctaatgttattctattttgaaggactgtactatcatttgccaaagcgagca
gctggtattcgttatgtattcattggcaagccaatgaatcagaggcctaggtatcagatt
ttgggtatttttctgttgattcagctgtgtattcttggcgccgaaagactccgaagaagc
aacatatcatccatagctagttccattaaccagatatcatctggaagctatccatcgtct
acaggtcgaggcgtccctgttttgaatgaagatggacatgtcatcagtgacatctgtggt
ggtaaagctgcagatgtggcttctcattcagaggcttccagtggcaagagtaaatgcacc
ctatgtctcggtacccggcaaaatcctactgccacgacctgtggacatgtcttctgctgg
aattgcataatggagtggtgcaatgagaaacctgagtgcccactatgccgaactccgatt
actcattcgagtttgatctgtatatatcattcagatttctag
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