KEGG   Setaria viridis (green foxtail): 117842825
Entry
117842825         CDS       T07951                                 
Name
(RefSeq) peroxisome biogenesis factor 10
  KO
K13346  peroxin-10
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:svs00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    117842825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:svs04121]
    117842825
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Peripheral membrane proteins
    117842825
SSDB
Motif
Pfam: Pex2_Pex12 zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 zf-rbx1 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_UBOX zf-RING_5 Prok-RING_4 zf-RING_6 zf-RING_10
Other DBs
NCBI-GeneID: 117842825
NCBI-ProteinID: XP_034579239
LinkDB
Position
2:complement(44035591..44040238)
AA seq 393 aa
MRAGTPAGDAGPSSHGGAGFGSGSRAPARPRRFPGAAQPEIMRAAEKDDSYAAHVTEACR
DAFRHLFGTRVAVAYQNEIKLLGQSLYYLLTTGSGQQTLGEEYCDISQVATLHGLPPTPA
RRILFILYQTTVPYLAERISSRIVARSIALNESQFDDHLESDNSSSGIAQSTTNNHVPSR
SLSVSALSRLRGRVHALWQWVLQKWPSMLPFAQDFIQLAIRTNLMLFYFEGLYYHLPKRA
AGIRYVFIGKPMNQRPRYQILGIFLLIQLCILGAERLRRSNISSIASSINQISSGSYPSS
TGRGVPVLNEDGHVISDICGGKAADVASHSEASSGKSKCTLCLGTRQNPTATTCGHVFCW
NCIMEWCNEKPECPLCRTPITHSSLICIYHSDF
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgcgagcaggcacccccgccggcgatgcgggccccagctcccacggcggcgctggcttc
ggctccgggagccgtgcgcccgcgcgtccgcggaggttccccggggcggcgcagccggag
atcatgcgggcggcggagaaggacgacagctacgcagcgcacgtcaccgaggcctgccgc
gacgcgtttcgacacctcttcggtaccagggttgctgttgcctatcagaatgagataaaa
ttgcttggtcagtccctttattacttgctaacaactggttcaggtcagcaaacactcgga
gaagaatattgtgatatatctcaggttgcaaccttgcatggacttccacctacaccagct
aggcggatccttttcattttgtatcaaactactgtgccctatcttgctgaacgaatcagc
tccagaattgttgcacgtagtattgccctcaatgaatctcagtttgatgatcaccttgaa
agtgataattctagtagtggcattgcacagtccaccacaaataatcatgttccatcaaga
agcttgagtgtttctgctttatcaaggttgagaggacgagttcatgccttgtggcaatgg
gttcttcagaaatggccttcaatgctgccatttgctcaagactttatacagttggctatc
cgaacaaacctaatgttattctattttgaaggactgtactatcatttgccaaagcgagca
gctggtattcgttatgtattcattggcaagccaatgaatcagaggcctaggtatcagatt
ttgggtatttttctgttgattcagctgtgtattcttggcgccgaaagactccgaagaagc
aacatatcatccatagctagttccattaaccagatatcatctggaagctatccatcgtct
acaggtcgaggcgtccctgttttgaatgaagatggacatgtcatcagtgacatctgtggt
ggtaaagctgcagatgtggcttctcattcagaggcttccagtggcaagagtaaatgcacc
ctatgtctcggtacccggcaaaatcctactgccacgacctgtggacatgtcttctgctgg
aattgcataatggagtggtgcaatgagaaacctgagtgcccactatgccgaactccgatt
actcattcgagtttgatctgtatatatcattcagatttctag

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