Setaria viridis (green foxtail): 117842830
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Entry
117842830 CDS
T07951
Name
(RefSeq) protein argonaute 18
KO
K11593
eukaryotic translation initiation factor 2C
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117842830
03036 Chromosome and associated proteins [BR:
svs03036
]
117842830
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117842830
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117842830
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
117842830
microRNA pathway
RISC loading complex
117842830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoMid
ArgoL2
Motif
Other DBs
NCBI-GeneID:
117842830
NCBI-ProteinID:
XP_034579245
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Position
2:38925810..38931556
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AA seq
954 aa
AA seq
DB search
MAGGGGRRGGRGRRRGKSNPSGAEEGNCNGHHHDDRGDAGLPGEGGGGGDNEVCRNGVGN
HHDGGGVGADCFGDDRGRAGPSKPADLRQAKPPLAASDDEPEDPAALLLEEFEALSIHVR
RAEPVLPPRPGYGAAGTPCVVRANRFLARLVNEGLHHYDVTIWPEPTPKGGYREVMSKLV
SENQRTELGGRFPVYDGRDSLFTAGALPFDSKEFEVTLSASVEKRRTRGRMYKVVIKHAA
AISLVQLRMLLAGYPTDIPAQALQVLDIVLSDVVFNERNDMEYSMVGALGVEAWKGLYQS
IRPMQNSLSVLVDVSSSVFIQPLLLIDFVEKRLKIDVSNRKLTKPEYAKLLKAVRGVRIE
VTHRGDERRKHRISGLSVKPTKELSFKSPTGATKTVIGYFKERYNLELKFNYLPCLNVGS
EQKPVYLPIEVCKIVPRQRYQKKLDGSQVSILRESTCQFQPEPKKSIPQVVERKQYNSTK
RANEFAIAVDDNLTIVNARVLMPPNLKYHDSGSQKTWFPTNGIWNMKDKKVVNGAKISNW
ACVNFCEDLSKNVVEQFCFKLAEMSRIIGVDLADLKLPIFTARPDQVEDDIRTCYQKVQN
KLRDQKIDLLLAILPDENGSLYGNVKRICETDIGLLSQCCRRSNVFTKSNQILANIAIKI
NAKAGGRNSVFNDAQKSLPVVSNKPTIIFGAHVTHPSTVDDSAPSIASVVASQDWHEVAK
YNGVVRSQGREDIISGLEDIVKELLRAFGKESNKKPQQLIFYRDGICESQSKQVLEKEIP
EIEKAWKALYDNEKPQVTFIVVQKRHSLRLFPNDNKYKHHVAKKKSVEPGTVVDSEICHP
AEFDFFLCSHLETKGPSRPVQYLVLRDDNNFTADELQALTNNLCYTYASCTQSVSIAPPA
YYAHKLAQRAHLYLAQGSGAATAASSSSSAAATAGGPKQLPEIKDELKRSMFYC
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggctggcggaggagggcgccgcggcggccgcgggcggcggcggggcaagtcgaacccg
agcggcgcggaggaggggaactgcaacgggcaccaccacgacgaccgcggcgatgctggc
ctccctggagaaggaggcggcggcggcgacaacgaagtgtgccgtaacggggtcggtaac
caccatgatggcggcggagtcggcgcggactgcttcggcgacgaccgcgggcgcgccggc
ccgagcaagcccgccgatctgcgccaagccaagccgcccctcgccgcgagcgacgacgag
cccgaggaccccgccgcgctgctactggaggagttcgaggcgctcagcatccacgtccgc
cgcgccgagcccgtgctcccgccgcgccccgggtacggcgccgcggggacgccgtgcgtc
gtcagggccaaccgcttcctcgcccgcctcgtcaacgagggcctgcaccactacgacgtg
accatctggccggagccgacaccgaagggcgggtacagggaggtcatgtcgaagctggtg
tccgagaaccagcgcaccgagctcggcggccgcttccccgtgtacgacggccgcgactcg
ctcttcaccgcgggcgcgctgccgttcgacagcaaggagttcgaggtcaccctctctgct
agcgtcgagaaaaggcggacgaggggcaggatgtacaaggtggtgatcaagcatgccgca
gcgatcagcctggtgcagctgaggatgctcttggcgggctaccccacggacatccccgcg
caggcactgcaggtcctcgacatcgtgctgagcgatgtcgtcttcaacgaacgcaatgac
atggaatacagcatggttggcgcactgggtgttgaggcatggaagggtctctatcagagc
atcagaccgatgcagaatagcttgtctgtgcttgtagacgtgtcctcatcagtattcatt
caacccctgctactaattgactttgttgagaagagactgaagatagatgtatcgaatagg
aaattgactaaacctgagtatgccaagctcttgaaggctgtcaggggtgtgaggattgaa
gtcacacaccgaggagatgaacgccgtaagcacagaatttctggcttgtcagtgaaacct
actaaagaattgagttttaaatcaccgactggagctacaaagactgtcattggttacttc
aaagaaagatacaatctggaactgaagttcaattatctcccatgcctcaatgttggcagt
gagcagaagccagtctatcttcctatagaggtttgtaagatagttcccagacagcgttac
cagaagaagctggatggcagtcaggtttctattctaagggaatcaacctgtcagttccag
ccagaacccaagaaatccattcctcaggttgtggagcgcaagcagtacaacagcaccaaa
cgtgctaatgaatttgccatagctgttgatgacaatcttactatagttaatgctagagtt
ctgatgcctccaaatctgaagtaccatgattctggatctcagaaaacatggtttccaacg
aatgggatctggaacatgaaagacaagaaagtagtaaatggtgccaagatcagcaactgg
gcatgtgtaaacttctgtgaagatttatccaagaatgttgttgagcagttttgctttaag
ctggctgaaatgtctcgtattattggagtggacttagccgatttgaagctcccaatattc
actgcgcgtccagatcaagttgaagatgatatccgtacatgctatcagaaggtgcagaac
aagctgagggatcagaagattgacctgctgcttgctatactgccagatgaaaatggcagc
ttatatggaaatgttaaaaggatctgtgagacagatattggtctcttgtcacagtgttgt
cgaaggtcaaacgtcttcacgaaaagtaaccagatattggcaaacattgctattaagatc
aatgccaaggccggaggaaggaactcagtattcaatgatgcacagaagagtttgccagtt
gtttcaaacaagccaacgattatatttggtgctcatgttactcatccttccactgtagat
gattctgctccttccattgcttctgtcgttgcgtcccaagactggcatgaggtggccaag
tataatggtgttgttcgctcacaaggtcgtgaagatatcatcagtggccttgaagacatt
gtcaaggagctccttcgtgcatttggaaaggagtccaacaagaagccccagcagctgata
ttctacagggatggcatatgtgagagccagtccaaacaggttttggaaaaagaaatccca
gagatagaaaaggcttggaaagcgctgtatgataatgagaagccacaagtcaccttcatt
gtagtgcagaagaggcatagcctaaggctgttccccaacgacaacaaatataagcaccat
gttgctaagaagaaaagtgttgagcctggtacagtggttgatagtgagatctgtcaccca
gcagagtttgatttcttcctttgcagccatcttgagaccaaagggccaagccgtcctgtg
cagtaccttgtgctgcgagatgacaacaacttcacagcagatgaactgcaggctctgacg
aataacctgtgctacacttatgcaagctgcactcagtcagtgtcgatcgctcctcctgct
tactacgcccacaagctcgcgcaacgcgcccacttgtacctcgctcaaggttccggcgcg
gcgacggcggcgagctcctccagtagcgcagctgctacagccggtggtccaaagcaactt
ccagagataaaagatgagctgaagaggtccatgttctactgctag
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