Setaria viridis (green foxtail): 117842933
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Entry
117842933 CDS
T07951
Name
(RefSeq) heat stress transcription factor C-2a
KO
K09419
heat shock transcription factor, other eukaryote
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117842933
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
117842933
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
117842933
NCBI-ProteinID:
XP_034579355
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Position
1:2304142..2305643
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AA seq
278 aa
AA seq
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MASGGGAGADAAGVAPFVAKTYRMVDDPSTDGVIAWGRDNNSFVVADPFVFSQTLLPAHF
KHSNFSSFVRQLNTYGFRKVDPDRWEFAHVSFLRGQTHLLPRIVRRSGGGGGKRKDDGCG
GGGDAGAVDEDAVAMELVRLKREQRAIEDQVAAMWRRVQETERRPKQMLAFLVKVAGDPQ
VLRRLVSSSGASGAGGASGGVGFASGPEEDCAGGEVAKRARLLLDGGDPVYGGGSSDAAA
AAEFGVFYSAGADDVGFGGEAGGYLQPPPYVFPVNSGY
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggcggcggcgcgggcgcggatgcggccggggtggcgccgttcgtggccaag
acgtaccgcatggtggacgacccgtccaccgacggcgtcatcgcgtggggcagggacaac
aacagcttcgtcgtcgccgaccccttcgtcttctcgcagacgctcctccccgcgcacttc
aagcactccaacttctccagcttcgtgcggcagctcaacacctacggcttccggaaggtt
gatccggaccggtgggagttcgcgcacgtatcgttcctgcgcgggcagacgcacctcctg
ccccggatcgtccgcaggagcggcggcggcggcggcaagcgcaaggacgacggctgcggc
ggcggtggcgacgctggggccgtggatgaggacgcggtggccatggagttggtccggctg
aagcgggagcagcgcgccatcgaggaccaggtggcagcgatgtggcgccgcgtgcaggag
acggagcgccggcccaagcagatgctcgccttcctcgtcaaggtcgccggcgacccgcag
gtcctgcgccgcctcgtctcctcctccggggcctccggggcaggcggcgcgagcggcggc
gtcgggttcgcctcgggtccggaagaggactgcgccggcggggaggtcgcgaagagggcg
cgcctgctcctcgacggcggcgacccggtctatggtggtggcagcagcgacgccgccgcc
gccgccgagttcggcgtgttctacagcgccggcgccgatgacgtcgggttcggcggcgag
gccggcggatacctgcagccgccgccgtacgtgttccccgtgaacagcggctactga
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