Setaria viridis (green foxtail): 117843001
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Entry
117843001 CDS
T07951
Name
(RefSeq) cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117843001
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svs01007
]
117843001
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117843001
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
117843001
Amino acid related enzymes [BR:
svs01007
]
Aminoacyl-tRNA synthetase
Class I (G)
117843001
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117843001
Prokaryotic type
117843001
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
CysS_C
tRNA-synt_1f
tRNA-synt_1
DALR_2
DUF6825
Motif
Other DBs
NCBI-GeneID:
117843001
NCBI-ProteinID:
XP_034579439
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Position
2:complement(38479738..38485338)
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AA seq
570 aa
AA seq
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MAAAAARRAAGLLPLLSSPSGARIPLRRALSLISPPRSNRLFSHPARPFSTSPFSASASA
SNGAAAERTRELHLYNTKSRKKEHFRPRAPDGEVGMYVCGVTPYDDSHIGHARAYVAFDV
LYRYLRYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRFSDDFLSDMANLQCLPPS
MEPRVSDHIDQIINMIKQILDNNCAYVVGGDVYFSVDNFPEYGELSGRKLDDNRAGERVA
VDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDL
IFPHHENEIAQSRAACCDSSISYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEMYHPLALR
MFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLHDCEESCQQQQDNSGDSLPANTLNYIQ
KLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESLAALEEKIRVVL
SVLGLLPSSYHEALQQLREKALRRASITEEHVLQKIEERTAARKAKQYEKSDEIRKELAA
VGIALMDGPDGTTWRPSVPLSEEEGVVVKT
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgcggcgaggcgtgccgctggccttctccctctcctctcctcgccgtcc
ggtgctcgcatccccctccgccgggcgctatccctgatctctccgcctcgctccaatcgc
ctcttctcgcaccccgccaggcccttctccacctcccccttctcggcctccgcctccgcg
tcgaatggcgcggccgcggagagaacccgcgagctgcacctgtacaacacgaagtcgagg
aagaaggagcattttcggccgcgagctcctgacggggaggtcggcatgtacgtctgcgga
gtcacgccctacgacgacagccacatcggccatgcccgcgcatacgtcgcctttgacgtc
ctctacaggtacttgcgttatttggactatgaagttcgctatgttcggaacttcaccgac
attgatgacaagataattgcaagagcaaatcaactgggggaagatccttttagcttaagc
aaaagattctctgatgatttcctgtcagacatggccaatcttcaatgtttgccaccatcc
atggagccccgtgtttcagatcatattgatcagattataaatatgattaaacagatcctt
gataacaattgtgcatacgtagtgggtggggatgtctatttctctgttgacaactttcct
gaatatggagagttatctggtcgaaaactagatgataatagagctggtgaaagggttgca
gttgatgaaaggaagagaaatcctgctgatttcgctctatggaaggctgcaaaagatggg
gagccatggtgggacagcccttggggccctggaaggccaggatggcacatagaatgcagt
gccatgagtgcacattacttgggtcattcttttgacatacatggtggtggggaggacctc
atctttccgcaccatgagaatgagatagcacagagccgtgcagcgtgttgtgacagtagc
ataagttactggatacacaatggatttgtcaatgtaaatagccaaaagatgtctaaatcg
cttggtaacttcgtaaccatacgcaaggttatagagatgtaccacccgcttgctttgaga
atgttcttactgggcacacactacaggtccccgatcaactacacaatagaacaactcaat
gttgcatcagatagattgtattacacgtatcagacgttacacgattgtgaagagagttgc
cagcaacagcaagataactctggagactcattacctgctaataccttaaattacatccag
aaactacatgatgaatttgagacttcaatgtcagatgatcttcacacttcagtagcactg
gctgctatttctgagccattgaaagtcatgaatgatttgttgcacactcgtaagggaaag
aagcaggaaaaacgattggaatcacttgctgccttggaagagaaaataagagtagtgctc
tctgttctaggattgctgccttcaagttatcatgaggctctgcaacaactgcgtgagaaa
gcactgagaagagcttccatcaccgaggagcatgtgctgcagaagatcgaagagaggact
gcagcaaggaaggcgaagcagtacgaaaaatctgacgagatcaggaaagaattggctgct
gttggaatcgccctcatggatggtcctgacggaacgacctggaggccatctgtgcctctt
tctgaggaggaaggggtggttgtgaagacttga
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