Setaria viridis (green foxtail): 117843198
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Entry
117843198 CDS
T07951
Name
(RefSeq) 3-ketoacyl-CoA synthase 4
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00062
Fatty acid elongation
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs04626
Plant-pathogen interaction
Module
svs_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
117843198
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117843198
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
117843198
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Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_N
Motif
Other DBs
NCBI-GeneID:
117843198
NCBI-ProteinID:
XP_034579648
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Position
2:36367001..36368893
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AA seq
486 aa
AA seq
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MDVAHRDHLLAAARRAFGAAVLVLCLLAELLVFALRHPAALQLVPACAMLLLLLWRSSGR
AAAASGVELVDFACLRPPRRLRIPIPALLEHLRLIGCFDEPSVEFMSRVIGASGMGDETY
FPPSLHRIPPSATHADALAEARAMFVPTLDALFARTGVPPSAVGALVVNCSGFCPAPSLA
ALIAGHYRMRADVRALNLSGMGCAAGVVGVDVARAALGAHAVDYAVVLSAEIVTVGWYGG
RDRRKLLLNCFFRTGCAAALLTGAGSAVSVPAKYRLVALARTNRTADDRSYTSAVREEDA
EGITGFSIGRGLGGVARDLLRAHLLELGPAILPWHEKLRYAATLLLFRRQQKRPKKLTDD
DGGGNNNGPRPSFLTAASHFCLPSSGMPMIRRLAEGLGLGELEAEAALMTFHRFGNQSAS
SLWYQLAYHEAKGRVRRGDRVWQLGMGSGPKANSVVWERVGGDTDAAAADDGPWADCIHR
FPIRES
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggcgcacagggatcacctcctcgccgcggcgcgccgcgcgttcggcgccgcg
gtcctggtcctctgcctcctcgccgagctcctcgtcttcgcgctcaggcaccccgcggcg
ctgcagctcgtcccggcctgcgcgatgctgctgctgctgctgtggcggtccagcgggcgc
gccgcggcggcgtcgggcgtggagctggtggacttcgcatgcctaaggccgccccggcgg
ctgcggatcccgatcccggcgctcctcgagcacctccgcctcatcggctgcttcgacgag
cccagcgtcgagttcatgtcccgggtcatcggggcctccgggatgggggacgagacctac
ttcccgccgtccctgcaccgcatcccgccgtcggcgacgcacgccgacgccctggccgag
gcgcgcgccatgttcgtgcccacgctcgacgcgctcttcgccaggacgggcgtgccgccg
tcggccgtgggcgcgctcgtcgtcaactgcagcgggttctgcccggcgccctcgctcgcc
gcgcttatcgcggggcactaccgcatgcgggccgacgtcagggcgctcaacctctccggc
atgggctgcgcggctggcgtcgtcggggtggacgtcgcgcgggccgcgttgggggcgcac
gccgtcgactacgccgtcgtcctcagcgccgagatcgtcacggtggggtggtacggtggg
cgggaccgccgcaagctcctcctcaactgcttcttccgcaccggctgcgccgccgcgctg
ctgacgggagctggctccgccgtctcggtgccggcaaagtaccggctcgtcgcgctggcg
cggacgaaccggacggcagacgaccgcagctacacgtccgcagtgcgggaggaggacgcg
gagggcatcaccgggttctccatcggccgtgggctcggcggcgtggcgcgcgacctcctg
cgcgcccacctcctcgagctcggccccgccatcctcccgtggcacgagaagctgcgctac
gccgcgacgctgctgctgttccggcgccagcagaagcgccccaagaaactcactgatgac
gacggcggcggtaacaacaatggcccaaggccaagcttcttaaccgcggcgagccacttc
tgcctgccgtcgtcagggatgccgatgatccggaggctggcggaagggctcgggctcggg
gagctcgaggcggaggcggcgctgatgacgttccaccggttcggcaaccagtcggcgtcg
tcgctgtggtaccagctcgcgtaccacgaggcgaaggggagggtccggcgcggcgaccgg
gtgtggcagctcgggatggggagcgggccgaaggccaacagcgtggtgtgggagcgcgtc
ggcggagacacagacgccgcggccgcagacgacggcccctgggccgactgcatccaccgc
ttccccatcagagaatcgtag
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