Setaria viridis (green foxtail): 117843281
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Entry
117843281 CDS
T07951
Name
(RefSeq) homeobox-leucine zipper protein ROC6
KO
K09338
homeobox-leucine zipper protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117843281
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
117843281
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117843281
NCBI-ProteinID:
XP_072147897
LinkDB
All DBs
Position
2:11620625..11625438
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AA seq
727 aa
AA seq
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MEKGGQQANENRHCLDFGNDPSHKLWNNQEDAIEDRLGDEGYAHTDPEDEDYVPECKPSK
PVKRKRLTPQQTQELMAVYGTCTHPDAEKLEALGTKIGLEPCRVKVWFQNRRPQMKKKAQ
VEQNKLIQQENASLLAENQSLRQAMLIQSCITCGGKTLPSDPLAEKQRLLIENTRLQDEC
LRASVVHGKIIHTSAFTKPAPWIISSGVDREALRRHADTSMEQFLVLATKGEPMWLPTTD
SEMLNYEYGARMSPCLFGLRPEGFVVEATRDTAMVWGTATDLIGILMDTVRICSIFPYVF
VVLQARWSETFPGVVASVVAGDFVSTGIFASCDGQIQLMNAELWVQSPRVPNCTVNILRF
SKLVDEKQWAVMDVSVDGILGREVTPARYMGCRLLPSGCLIKDLSNGYCKVTWIVHVEYD
ETTVPMMFKPLFLTGQALGARRWLASLQRQREYAAALHSSRDLGNNNTGILKLAQQMMAS
FYTAVSGPVTQTQATSNINEWFGSMGTGVERPDAPVRMVTWRKAGTASGEPADLVLSATT
TLWLPSTPPEHVFDYLRNEKLRGEWDMLTIDTAVKELGYIATGHPGNVVSVLCSNITDGT
KNKMLILQEARTDVSGSLVVYAPIRENTMHAVMNSGNNTFVSFLPSGFAILPDGHGKASQ
ALVTAASTSRAPVCRHNNTEGSLLTMAYQVLLPDNLTAGAMDDVGKLICHAINKIKTAVK
ADIILPA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagggggtcaacaagccaatgagaaccgacattgtctggacttcggaaatgac
ccctcccataagctatggaacaaccaggaggatgcaattgaggaccgcttgggagatgag
ggctatgcccacactgatcctgaagatgaggactatgttcctgagtgcaagccctcaaag
cctgttaagcgcaagcgcctcacaccacagcagactcaagaactcatggctgtgtatggc
acgtgtactcacccagatgccgagaaactggaggcacttggcacaaagattggtttggag
ccatgtcgggtgaaggtctggttccaaaacagacgccctcaaatgaagaagaaggctcag
gtggagcaaaacaaactgattcagcaagagaatgcttcactgctggctgagaaccaatca
ctccgtcaggccatgctgattcagtcatgcatcacatgtggtggcaagacactgccctcc
gatccattggcagagaagcagcgcttgctcatcgagaatacaaggctccaggatgaatgt
ctgcgtgcttctgttgtccacggcaagattatccacacttctgctttcacaaaacccgcg
ccgtggatcatcagcagcggagttgatcgtgaagcacttcgccgtcacgcagatacatct
atggagcagtttctggtgctcgcaaccaagggggagccgatgtggctacctaccactgac
agtgagatgcttaactatgagtacggagccagaatgtctccgtgcttgtttgggctccgc
cccgaggggtttgtcgtggaggcaaccagggacactgccatggtttggggcactgctact
gacctcattggcatcctgatggacacggtacgtatctgctccatttttccgtatgtcttt
gtcgttttacaggctcgctggtctgagacgtttccaggggtcgtggcaagtgtggtagct
ggtgattttgtatccactggcatttttgcttcatgcgatgggcagattcagctgatgaat
gccgagctgtgggtgcagtcaccacgtgtgccaaactgcaccgtgaacattttgaggttt
agcaaactggttgatgagaagcaatgggctgtgatggacgtttctgttgatggcatcctt
ggacgggaagtgacaccagctaggtatatgggctgcaggctgcttccatctggctgccta
attaaggacctgagcaatggatactgcaaggtcacatggattgtgcatgtggagtacgat
gagaccaccgtgccaatgatgtttaaaccactattcctcaccggacaagccctgggtgcg
cgccgctggctcgcttcactccagaggcagcgtgaatatgccgctgctttgcactccagc
cgtgatctaggcaacaacaacacaggtatcctaaagctggcgcagcagatgatggcaagc
ttctacacggctgtctctgggcctgtcactcagactcaggcaacgagcaacatcaacgag
tggtttggcagcatgggtactggcgttgagaggcctgatgcacctgtacgcatggtgacc
tggagaaaagctggcactgcatctggagaacccgccgacttggttcttagtgccaccacc
acgctgtggctacccagcactccacctgagcacgtgttcgactatctccgcaatgagaag
ctccgtggcgagtgggatatgctcaccattgacaccgcagtgaaggagttaggctacatt
gccacgggccaccctggcaatgtcgtgtctgtcctctgctccaatatcactgatggaacg
aaaaacaagatgttgatcctgcaggaggcacgcacggacgtgtcaggctccctggtggtg
tacgctcctattagagagaacaccatgcatgctgtcatgaacagtggtaacaacaccttt
gtctccttcctgccatctggatttgccatcctcccagatggccacggcaaagctagccaa
gctctggtcactgctgcaagcacctccagagctcccgtctgtcgccacaataacaccgag
gggtctcttctaaccatggcctaccaggtactgctgcctgacaatctcaccgcaggggcc
atggatgatgttggaaagctgatctgccatgcgataaacaaaatcaagactgccgtcaag
gctgacatcatcctcccagcttga
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