Setaria viridis (green foxtail): 117843296
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Entry
117843296 CDS
T07951
Name
(RefSeq) CSC1-like protein ERD4
KO
K21989
calcium permeable stress-gated cation channel
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117843296
Transporters [BR:
svs02000
]
Other transporters
Pores ion channels [TC:
1
]
117843296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117843296
NCBI-ProteinID:
XP_034579758
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Position
2:complement(2780953..2784991)
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AA seq
738 aa
AA seq
DB search
MDFASFITSVLTSFVIFVVLVLVFTWLSRRPGNAPVYYPSLLLRGLDPWEGRRRGSRSPV
GWIREALSASETDVIAAGGVDAAVYLVFLSSVLSILVFSGIVLLPVLLPVAGTDHALDLH
AAAGFKPKTDNKDDSAPDFPQMERLALGNVQPKSMRLWAFLLSVYWVSFVTYFILWKSYK
HVSNLRATARSTPDVKPEEFAVLVRDVPRPSPDETIKDSVDSYFRALHPNTFYRSMVVTD
HAKADKMYLEIEDHKKKIARAEVVYANSKTESNPEGTKPTHRTGFLGLIGKKVDTIEYCS
EQIKELLPKLEVEQKATLRDKQQRAAIVFFNSRSAAASASQTLHAQVFDKWAVMEAPEPR
EIIWPNLSRNIYERQIRQVVVYFIVFLTVVFYTVPITAVSAVTTLDNLRKVLPFLKVVVD
RPAIKTILQAYLPQIALIVFLALLPAFLMFLSKAEGIPSQSHVVRASAGKYFYFIVFNVF
LIYTLGKSLITSLKTILNNANITVIINMLATSLPGGATFFLTFVALKFFVGYGLELSRVV
PLVIFHLKRKYLCKTEDDVKAAWYPGDLGYSTRVPNDMLIATVTLCYSVMAPLIIPFGVA
YFALGWLIAKNQVLRVYVPSYESNGRMWPHMHTRIIAALLLYQATMIGVIGLKKFYYSPI
LVPLLPISIIFAYICHMRFYPAFANTPLEVAQHELKETPNMDAIYTAYIPQCLKPDKLED
LDVFEDAQSHTTSRAPSI
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgcgtcgttcattacgtcggtgctgacgtcgttcgtcatcttcgtggtgctg
gtgctggtgttcacgtggctgtcgcgccgccccgggaacgcgccggtgtactacccgagc
ctcctgctgcgggggctcgacccgtgggagggccgccgccgcgggagccgcagccccgtc
gggtggatccgcgaggccctctccgcgtcggagaccgacgtcatcgccgccggaggggtc
gacgccgccgtatacctcgtcttcctctcctccgtattgtcgatcttggtgttctctggg
attgtgctgcttccggttctcctccccgttgccggaactgatcatgccctggaccttcat
gctgctgctggcttcaagccaaaaactgataacaaagacgactcagctccagacttccca
cagatggaaagactagcattgggcaatgttcaaccaaaaagtatgaggctgtgggcattt
ctgttgtcagtctactgggtttcatttgtcacctattttatcctgtggaagtcatacaag
catgtttcaaatttgagagcgactgcaagatcaacaccagatgttaaaccagaggagttt
gcggtgttggtgagagatgtccctagaccctctccagacgaaactataaaggactctgta
gattcgtatttccgagcacttcaccctaacaccttctacagatcaatggttgtgacagac
cacgcaaaggctgataaaatgtacttggagattgaagatcacaagaagaaaattgcccgc
gctgaagttgtctatgcaaactcgaaaactgaaagtaaccctgagggcactaagcctact
cataggaccggattccttggtctgattggtaaaaaggtcgacacaattgaatactgtagt
gagcagattaaggaattactgcccaaactggaggttgaacagaaggctacccttcgtgac
aaacagcagcgggctgccattgtcttcttcaatagcagatctgccgcagcttctgcatct
caaactctccatgctcaggtgtttgataaatgggcagttatggaagctcctgaaccacgt
gagataatatggcccaatctttcgagaaatatttatgagaggcaaatcagacaggttgtg
gtctatttcatcgtcttcctcacggtggttttctatacggttcctattactgctgtctct
gctgttacaactctggataacctgaggaaggtgctgccctttctgaaggtggtagtggat
cgtccagcgatcaagaccatcttgcaggcttacctgccacagattgcactcattgtgttc
ctagccctgctgcctgcttttcttatgtttctctcaaaagcagaggggatcccttctcag
agccatgtagtcagggcatcagcaggaaaatatttctactttattgttttcaatgtcttc
cttatctatacacttgggaagtcattaatcacctctttgaaaactattttaaataacgct
aacattactgtgatcataaatatgctggccaccagcctgcctggaggtgcaacattcttc
ctcacattcgttgccctgaaattctttgttggttatggtctcgagctctctcgcgtggtt
cctctcgtcattttccacctgaaaaggaagtacctatgcaaaactgaggatgacgtgaaa
gcagcatggtatccaggagacttgggatatagcaccagggttccaaatgacatgctcatc
gcaacagtaacgctgtgctactcggtcatggcacctttgattattccatttggtgttgca
tactttgctcttggatggcttatagcaaaaaaccaggttcttagagtttatgttcctagc
tacgagagtaatggtcgaatgtggccacacatgcacacaaggatcatcgcagctctactc
ctttaccaggccaccatgattggcgtcattggcctgaaaaagttctattactcacctatc
cttgtgccactcctcccgatcagcatcatctttgcctacatctgccatatgcgcttttac
ccagcattcgccaacacccctctggaggtggcgcagcacgagctgaaggaaacgccaaac
atggacgccatctacactgcgtacatccctcagtgcctgaagcccgacaagctcgaggat
ttggatgtctttgaagacgctcagtcgcacaccacctccagagccccgtccatttag
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