Setaria viridis (green foxtail): 117843324
Help
Entry
117843324 CDS
T07951
Name
(RefSeq) probable calcium-binding protein CML24
KO
K13448
calcium-binding protein CML
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117843324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
EF_EFCAB10_C
EF-hand_9
EF-hand_FSTL1
AIF-1
EH
Caleosin
Dockerin_1
DUF1979
EF-hand_14
SPARC_Ca_bdg
SAP
ThrE
Gta3
Motif
Other DBs
NCBI-GeneID:
117843324
NCBI-ProteinID:
XP_034579785
LinkDB
All DBs
Position
2:complement(46972774..46975276)
Genome browser
AA seq
196 aa
AA seq
DB search
MAGTNQGVVAVKLALAKGTPSASFRLRNGSLNAVRLRRVFDLFDRNGDGEITVDELAQAL
DALGLDADRASLAATVGAYVPEGAAGLRFEDFDTFHRALGDAFFGALADKDDAAEGGKGG
EDEEEIREAFKVFDVDGDGFISAAELQEVLKKLGLPEASSMANVREMICNVDRDRDGRVD
FSEFKCMMQGITVWGA
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcacgaatcagggcgtggttgcggtgaagctggcgctggccaaggggacgccg
tcggcttcgttccggctccgcaacggcagcctgaacgcagtgcgcctgcgccgcgtgttc
gacctcttcgaccgcaacggcgacggcgagatcacggtggacgagctggcgcaggcgctg
gacgcgctgggcctggacgccgaccgcgccagccttgccgccaccgtgggcgcctacgtg
cccgagggcgccgcggggctgcgcttcgaggacttcgacacgttccaccgcgcgctcggc
gacgccttcttcggcgcgctggcggacaaggacgacgccgcggagggcggcaaggggggc
gaggacgaggaggagatacgggaggccttcaaggtgttcgacgtcgacggcgacggcttc
atctccgccgccgagctgcaggaggtgcttaagaagctgggactccccgaggccagcagc
atggccaacgtgcgagagatgatctgcaacgtcgaccgcgaccgcgacggccgcgtcgac
ttcagcgagttcaagtgcatgatgcaggggatcaccgtctggggcgcctga
DBGET
integrated database retrieval system
