Setaria viridis (green foxtail): 117843409
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Entry
117843409 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K14411
RNA-binding protein Musashi
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117843409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117843409
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117843409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
117843409
NCBI-ProteinID:
XP_034579882
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All DBs
Position
2:43003613..43008547
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AA seq
471 aa
AA seq
DB search
MEADSGKLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSAVA
ERVTTDKHMIDGRMVEAKKAVPRDDQSIASKNNGSSIGSPGPGRTRKIFVGGLASNVTEV
EFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKR
AVPKEQSPGPIARSPAGGQNYAMSRVHNILNGFNHGYNPNPIGGYGMRVDGRYGLLTGAR
NGFSSFGPGFGMGMNMEGGMSGNFGASSGFINSSNGRQLGSYYNGSSNRLGSPIGYVGLN
DDSGSILSSMSRNVWSNGNLNYTGNPTNMNAFAPPGNGGGIPGDGISWGGLNSAHGMGNL
SSLGLGNLGRGTGDSNYGLPSGNYVRSNSTGTIGEPFSASANAYESNNPGAYGSSSIYGD
STWRFTSSEVEMPPFGHDLGNVDPDIKSEISAGYMGNYTVNNNQTSRGITS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgactccgggaagctcttcgtcggcggcatctcctgggagacggatgaggac
cgcctccgcgagtacttcggccgcttcggggaggtcaccgaggccgtcatcatgcgggac
cgcaacaccggccgcgcccgcggcttcggcttcgtcgtctttgccgactcggccgtggcg
gagcgcgtcaccacggacaagcacatgatcgacggccgcatggtggaagccaagaaggct
gttcccagggacgaccagagtatcgcgagcaagaacaatggcagcagcatagggtcacct
ggaccagggcgtactagaaagatctttgttggaggcctggcttcaaacgttaccgaggtt
gagttcagaaggtactttgagcaattcggtgtgataaccgatgtggtcgtgatgtacgac
cacaacacgcagaggcctaggggatttggtttcatcacctatgactcagaagacgctgtg
gataaggctctgcacaagaacttccatgagctgaatggtaaaatggttgaggtcaagagg
gctgtcccaaaggagcagtctcctggacccattgcacgttcacctgcaggagggcagaac
tatgctatgagcagagttcataacattctgaatggcttcaaccatggttacaacccgaac
ccaattggtggttatggcatgagggtggacggaaggtatggcctccttacaggtgcacgg
aatgggttctcttcgtttggtccaggttttggaatgggcatgaacatggaaggtggaatg
agtggaaattttggtgcaagttctggtttcatcaatagctccaatggacgacaattaggt
tcttactacaatggtagttcaaacagattaggtagtcctattgggtatgttggccttaat
gacgattcaggatcaatactgagttcaatgtctagaaatgtctggagtaatggaaatctg
aactacacaggcaaccctacaaacatgaatgcttttgctccaccgggaaatggtgggggt
attcctggtgatggtattagttggggtggccttaactctgctcatgggatgggcaacctt
tcaagccttgggttgggaaaccttggtcgtggaactggagatagcaactatggcttgcct
tctggcaattatgtgagaagcaattcaactggtaccattggcgagccattttctgcatca
gccaatgcatatgaatcgaacaatccaggtgcatatggcagcagctctatttatggtgac
tcaacctggaggttcacgtcatctgaggtcgagatgcctccttttggtcatgaccttgga
aatgttgatccggatatcaaatcagaaatatcagcaggttatatgggcaactatactgtt
aataataatcagacaagcagaggtatcacttcctag
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