Setaria viridis (green foxtail): 117843441
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Entry
117843441 CDS
T07951
Name
(RefSeq) ubiquitin-ribosomal protein eL40y fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03010
Ribosome
svs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
117843441
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117843441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
svs03011
]
117843441
04121 Ubiquitin system [BR:
svs04121
]
117843441
Ribosome [BR:
svs03011
]
Ribosomal proteins
Eukaryotes
Large subunit
117843441
Archaea
117843441
Ubiquitin system [BR:
svs04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117843441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Plexin_RBD
Dsc3_N
Ubiquitin_5
UBL_UBAC1
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
117843441
NCBI-ProteinID:
XP_034579915
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All DBs
Position
2:26633493..26634770
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AA seq
140 aa
AA seq
DB search
MQIFVKTLTGKTVTLEVESSDTITNVKAKIQDKEGIPPDQQRLIFAGKQLEDERTLADYN
IQKESTLHLVLRLRGGGGKGGSYPKIDLNLLQLALKYRQHKMICRKCYARNSSRAENCRK
KKCGHTSELRPKKKLDAKRE
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagacgttgacggggaagacggtgacgctggaggtcgagagcagc
gacaccatcaccaatgtcaaggccaagatccaggacaaggaagggatcccgcctgaccag
cagcggctgatcttcgccgggaagcagctggaggacgagcggaccctggccgactacaac
atccagaaggagtcgacgctgcacctggtgctccgcctccgcggcggcggcggcaagggc
ggcagctaccccaagatcgacctcaacctcctccagctcgcgctcaagtaccgccagcac
aagatgatctgccgcaagtgctacgcccgcaactccagcagggccgagaactgccgcaag
aagaagtgcggccacaccagcgagctgaggccaaagaagaagctggatgccaagagagaa
tga
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integrated database retrieval system
