Setaria viridis (green foxtail): 117843485
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Entry
117843485 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10891
fanconi anemia group D2 protein
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117843485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117843485
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
117843485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
117843485
NCBI-ProteinID:
XP_034579983
LinkDB
All DBs
Position
2:complement(3181248..3192911)
Genome browser
AA seq
1489 aa
AA seq
DB search
MVFLQRSRPVNPRKRPPPPPDADPPEPAGAGHSSAVDAAAALLADAGCTLLVPAHQAPPL
PSPHAFAARLGRALSADPSAAPRLLAGVAAFASASPARLRQLLLPSAPHVPSLARALLSV
PALQPDLLALLLEKLPEHFDDGGGALDGLPLQDDVGRLIVSQFRWLDFLADADAFVEKLV
EVLSVAPPRLKKEIIGSLPEIVGDQSHAAVVAALEKLLQEDSEVVIAVLDVLSDLNLNEE
LQEQAVTVAISCIRTISPDQMPHLLRFLLLSATPANAGRIILQIREQLRLVGVVDPRAAR
SKKMKGKALANSTDGAILDTLRSGLRFKNMLCEAFLKELKSVDHPRDHKVIDVWLIMLIY
ANGGALQKSAEKILKSKILQGCIRETLFDQCIHGNTELVKEHFMLFLSMSDYLLACKEEK
AREFASYLFTALFEEFSDTYSRQELVGSLVAHIGSGVSYEVSSSLDIMISLTSNHSEELI
PISSHITGILDYLESFHEDNLRKVYDIFCHLALAAGFNIGSGGSSVANELLMVVRKQVSN
PDMKYRRMGIIGALRIVSTIADVDVNAAVNCSSSQQLNCEEALELLKMSVNSCKFVTLPL
IFLYDELASLLESKVLHSAIVEWLGDYLAEFDTSFLADLNNGELSEKYLNDGIEGELWMN
LDGDLSPICVNIVPLASTLPQKSQPCLQILPSQFSLLTTVERLINEGSLGGLNALLGCPL
HLPSTKHLDGAKWGNLSGLQKKAVCHSLYYAINWIRELLNAFSTQVASRIDNFSQKARDE
TAVKLLKRLRNLIFLEGLLNAFLKKYPLSLPELQYLGDCSGSTSTSKFNLPKTMGEESMD
GTSSNKRQKGRKDKAASERMNPDDKLKQPTVLDAFKRAGVTVSQATNKASSQPSSSGMMS
KNIEQEANDPGEFGFVDLMAAPVQLDMQRFKFRSLHTRCLSLLNYSECQDSSCSYLETEL
PIYLYLLRDLHNKLDNLNPTTKPFLSTYQAKCSQVYCHKSTQEFLDKIQPLFSVLRKHLD
GAVSMIKDESESCTDNWSSHSSSAGNPDIPYVVISKSSIATAVCKEILGCYRKVLLAFPD
LLNQPNMSGLKQLLQTLQPTENFDDILSEFQPSLAPSNVDYLYCGACKMFEDIMDPVRSF
SYLLSSDVLITMQSIVNSVVVLLDEPGESNRKNLQIGCSKAIIPFLRKRLGQSAHKLLTA
DHPSEDAENGCQSKGDLIQKILQIYLRNSDSTTDLLHELSGALSQVPSTKAQGTQDASNG
FPTLCSSTIPSWYRVLHEENTGGLNKMIKQALKTRGLPERGSIDTILEEIQKSVKVFVSL
IEKCKTHEKVSMHAMAVKHGGKYIDTFLKAFNFLETQFKEHNAIILQMLKELQKATRIIQ
TICAEAKGYKRTMITSKIPPAKRSMERFLFQVKALLHNCSTEKKFWMGNLKHKDLHGHVV
SSQVYGSVDEEDEEQTESDSDTPAAENDNTMDEDDAAAEGSNEAPMEEE
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcctgcagcgcagccgccccgtcaacccccgcaagcgcccgccccctccgccc
gacgccgacccccccgagcccgccggcgccggccactcctccgccgtcgacgcggcggcg
gcgcttctcgctgacgccggctgcacgctcctggtcccggcgcaccaggccccgccgctc
ccctcgccgcacgccttcgcagcccgcctcgggcgcgcgctctccgccgacccctccgcc
gccccgcgcctcctcgcgggcgtcgccgccttcgcgtccgcctcccccgcgcggctccgc
cagctgctcctcccttcggccccgcacgtgccgagcctcgcgcgcgcgctcctctccgtc
ccggcgctccagccggacctcctcgcgctgctcctcgagaagctgcccgagcacttcgat
gacggcggcggggcgctcgacggattgccgctgcaggacgacgtggggaggctcatcgtc
tcgcagttccggtggctcgatttcctcgccgacgccgacgccttcgtcgagaagctcgtc
gaggtgctgtccgtggcgccgcccaggctgaagaaggagatcattggctcgctcccggag
atcgtaggcgaccagagccatgccgccgttgtcgccgcgctcgagaagctcctgcaggag
gactcggaggttgtcatcgctgtgctcgatgtattgtcggatcttaacctcaacgaggag
ttgcaggagcaggcggtgactgttgcgatatcgtgcatacggacgatttctccggaccag
atgccgcatttgctcaggttcttgctgctgtctgctacaccagccaatgctggaaggatc
atattgcagatccgcgagcagctgaggcttgttggtgttgtggatccacgggctgctcga
agcaagaagatgaaggggaaggcattggcaaacagcactgatggggcaatacttgatacg
ctgagatctggcctaaggtttaagaatatgctttgtgaggctttcttgaaggagctgaag
tcagttgaccacccaagggatcacaaagtgattgatgtttggctcatcatgcttatctat
gccaatggtggtgctctgcagaagagtgcagagaaaatattgaagtccaagatcttgcag
gggtgcatacgagagacactgtttgatcaatgcattcatgggaacactgaattggtaaag
gaacatttcatgttgttcctctcaatgagcgattacttgttggcttgcaaggaagagaaa
gctagagagtttgcatcctatttgtttacagctttgtttgaagaattcagtgatacatat
tccaggcaagagcttgtaggctcattggttgctcatataggttctggggtcagctatgaa
gtttcgtcttctctggatataatgatttctctaacatccaaccattcagaggaattgatt
cctatatcttcacatataactggaatattggattacttggagagtttccatgaagataat
cttcggaaggtttacgatatcttctgtcatttggcactagctgctggtttcaacattggt
tcaggtggctcttctgtagctaatgaacttctaatggtggtgagaaagcaggttagcaat
ccagatatgaagtataggagaatgggaataattggagctttaaggatagtttcaactatc
gctgacgttgatgtcaatgctgcggtgaactgttcatcttctcagcaactgaattgtgag
gaggccctggaactgttgaagatgtctgttaactcctgcaaatttgtgacattgccctta
atttttctatatgatgagttagcttctttactggagagcaaagttcttcactctgcaatt
gttgagtggctaggagattatcttgcagaatttgacacatcatttcttgctgatctaaac
aatggtgagctatcagaaaaatacctgaatgatggcatagaaggagaattatggatgaac
ttggatggagatctctctccaatatgtgttaatattgtgcctctagcctccactttgcca
caaaaatctcaaccctgcttgcagatcctcccatcccaattttcacttttaactacagtt
gaacgtttaataaatgaaggctcgcttggtggattaaatgcactacttggctgtcctttg
caccttccctctaccaagcatttggatggagccaaatggggaaacttatcaggattgcag
aaaaaggcagtgtgccattcactgtactatgcaataaactggatcagggagttgctcaat
gctttcagcacacaggttgcaagtaggattgataatttctcacagaaagcaagggatgag
acagcagtaaaacttctaaagcgtctgagaaatctgatatttcttgagggcttgctgaat
gcgtttctaaaaaaatatcctctatctctacctgagctgcaatatcttggggattgttct
ggatcaactagcaccagcaaattcaaccttccaaagacaatgggagaagagagcatggat
ggcacatcttccaacaaaagacaaaagggtcgcaaggacaaggcagcctcagaaagaatg
aatcctgatgataaactcaagcaacctacggtactggatgctttcaaaagagcaggagta
acagtcagtcaagcaacaaacaaagcttcttctcaaccatcgtcaagtggaatgatgtca
aagaatattgaacaagaggctaatgatcctggtgagtttgggtttgtagatttaatggca
gcaccagttcagctggatatgcaaagattcaaattcagaagtctccatacaagatgcttg
tctttgttgaactactcagagtgtcaagattcatcttgttcttaccttgaaactgagcta
cctatatatctatatcttctccgtgatctgcacaacaaattagataatctaaatcccaca
accaagccttttcttagtacttatcaagcaaaatgttcgcaagtttattgccataagagc
acacaagaattccttgacaaaatccagccactattctcggttctaaggaagcatctagat
ggggcagtttcaatgatcaaagatgaatcagagagctgcacagataactggagttcacat
tcctcttcagctggcaacccagacattccgtatgtggtgatctcgaaatcatcaattgca
actgcagtatgtaaagagattcttggctgctacaggaaggttttactggcctttcctgat
ctattgaatcaaccaaacatgtcaggtctgaagcaacttttacagactttgcagccaaca
gaaaattttgatgatattctttcggagttccaaccatctcttgctcctagcaatgttgat
tatctatactgtggagcatgtaaaatgtttgaggatattatggatccagtgcgctcgttc
tcatatcttctgtcttctgatgtgttaattactatgcaatcaattgtaaattctgttgtt
gtgttgttggatgaacctggggaatcaaataggaagaacctacaaataggatgttccaaa
gcgatcattccctttctgcgaaagcgtcttgggcagtcagctcataaactgctaactgct
gatcaccctagcgaagatgctgaaaatggatgccagagtaaaggtgatcttatacagaag
atattgcaaatatacctaagaaatagtgattccactacagatctgcttcatgagctttcc
ggagcattgtctcaggtaccttcgaccaaagcacaaggtacccaggatgcgtcaaatggt
tttccaacactctgttcctccactatcccctcttggtatcgtgtcctacatgaggagaat
actgggggtttaaacaagatgatcaagcaggccctcaagactagaggattaccagaaaga
ggatcaattgatactattctggaggaaattcagaaatcagtgaaggtgtttgtttctcta
atagaaaagtgcaagactcatgaaaaggtatctatgcacgcaatggcagttaaacatggg
ggaaagtatatcgacacatttctgaaagccttcaactttctagagacacaattcaaggag
cataatgccattatacttcaaatgctaaaagaacttcagaaagcgacaagaataatccaa
actatatgtgcagaggctaagggttacaagcggacaatgatcacaagcaaaatacctcct
gcaaagagatccatggagcggttcttgttccaagtcaaggcgctgctacacaactgctcc
acggagaagaaattttggatgggcaatttgaagcacaaggacctgcacggtcatgtggtg
agctcccaagtgtatggaagcgtggatgaggaagatgaggagcagacggagtctgactcg
gacactccggctgccgagaacgacaacaccatggacgaggatgatgcggcggcggaaggg
agcaacgaggcgccgatggaggaggaatag
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integrated database retrieval system
