Setaria viridis (green foxtail): 117843523
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Entry
117843523 CDS
T07951
Name
(RefSeq) probable ribose-5-phosphate isomerase 3, chloroplastic
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00030
Pentose phosphate pathway
svs00710
Carbon fixation by Calvin cycle
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01200
Carbon metabolism
svs01230
Biosynthesis of amino acids
Module
svs_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
svs_M00007
Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P
svs_M00165
Reductive pentose phosphate cycle (Calvin cycle)
svs_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
117843523
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
117843523
Enzymes [BR:
svs01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
117843523
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_5-P_isom_A
DeoRC
FAM186A_PQQAQ
Motif
Other DBs
NCBI-GeneID:
117843523
NCBI-ProteinID:
XP_034580026
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Position
2:complement(4319596..4321527)
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AA seq
272 aa
AA seq
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MAATAISVRLHPAAARHVTAARRARLGAVRAQSAPAAAALTQDDLKRLAAVRAVEQVQSG
MVLGLGTGSTAAFAVAEIGALLASGKLEKIVGVPTSKRTFEQAQSLGIPLSTLDDHPLID
LAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDETKLVDGLGGSGLAMPVEV
VQFCWKYNLVRLQELFKEEGVEAKLRLEGDKPYVTDNSNYIVDLYFKTPIKDALAAGEAI
AALEGVVDHGLFLNMASSVIIAGSDGVSVKTK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccgccatctccgtccgcctccacccggcggccgcgcgccacgtcaccgcg
gcgcgccgcgcccgcctcggggccgtccgcgcgcagtccgcgccggcggcggcggcgctg
acgcaggacgacctgaagcggctggcggcggtgcgcgcggtggagcaggtgcagagcggg
atggtgctgggtctcgggacggggtccacggccgccttcgccgtcgccgagatcggcgcg
ctcctcgcctctggcaagctcgagaagatcgtcggcgtgcccacctccaagcgcaccttt
gagcaggcgcagtcgctcggcatcccgctctccacgctcgacgaccacccgctcatcgac
ctcgccatcgacggcgccgacgaggttgacccagaccttaaccttgtgaaagggcggggt
ggtgcgcttctccgtgagaagatggttgaggctgcatcagacaagtttattgttgttgtt
gacgagacaaaactagttgatggattaggaggaagtggtctagccatgccagtggaagtt
gtgcagttctgctggaagtataacctagtaaggttgcaggaactgtttaaggaggaagga
gtcgaggcaaagctaagattggaaggtgacaaaccttatgttactgacaactcaaactac
attgtcgacttatacttcaagacaccaatcaaggacgcattggcagcgggggaggcaatt
gcagctttggaaggagttgttgaccatgggttgttcttgaacatggcgagttcggtgatc
attgctggatcagacggtgtcagtgtcaaaacaaagtga
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