KEGG   Setaria viridis (green foxtail): 117843533
Entry
117843533         CDS       T07951                                 
Name
(RefSeq) pre-mRNA-processing protein 40A
  KO
K12821  pre-mRNA-processing factor 40
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117843533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:svs03041]
    117843533
Spliceosome [BR:svs03041]
 Complex A
  U1 snRNP components
   U1 related factors
    117843533
 Complex B
    117843533
SSDB
Motif
Pfam: FF WW WW_TCERG1
Other DBs
NCBI-GeneID: 117843533
NCBI-ProteinID: XP_034580043
LinkDB
Position
2:complement(25692700..25706677)
AA seq 983 aa
MASNMQPSGPPQPPRPPMMGSNAQPQNLGPPMPMQFRPVVPSQQPPQFMPPPAQQFRPVG
QPMPGANIGMPGQMPHFPQPGQHLSHSSQVPPASQGVPMAYQPARPMSSAPMQPQQQAVY
PGGHMPTMGAPMQPPSYTYQPTSIPPVVQPWGQSVPHVTPLVQPGHQPVPATATLPSVNS
SEPSSSDWQEHTAAEGKKYYYNKKTRQSSWEKPVELMTPLERADASTEWKEFTTPEGRKY
YFNKVTKQSKWTIPDELKAARELAEKASNQQSDRETGTAAALVGSAASEPSTVPANQSST
AVGLIAPSAHDASANPVPPGPVPSHNVDNTSSSSTIGMQNGGTSTAVVPVPTSTEVKLVA
TDAGTSRNNNESSSVTTGADIEDGTSAEDLEEAKKTMPVAGKINVTPLEEKTSEEEPVVY
ATKTEAKNAFKSLLESVNVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLNQRKK
FEAEEKRIKQRKARDDFLAMLEECKELTSSTRWSKAILMFEDDERFKAVERPREREDLFE
GYLVELHKKEKAKAIEEHRRHVAEYKAFLESCDFIKATTQWRKVQERLEDDERCSRLEKI
DRLNVFQDYIRYLEKEEEEQKRIQKEHVRRQERKNRDGFRKMLEEHVNDGTLTAKTRWRD
YCSQIKESQAYLAVASNTSGSTPKELFDDVIEELDKQYLDDKTCIKEVVKSGKIPMTTSW
TLEEFQTAILEDDALKGISTINIKLIYDDQIERLREKEQKDAKKRQRLGENFSDLLYSIT
EISAASTWDDSKQLFEDSQEFRALDSETYARELFEECVVHLKERLKEKERLREEEKAKRE
KDREEKEKKKEKERKEKERKEKDREKEREKEKGKDRSRRDETDIDGADVENHGSKDKKRD
KQKKHKRRHHDTDDASSERDDKDDAKKSRRHTSDRKKSRKHTHASDSDSENRHKRHRKDR
DSSRRNGAHELEDGELGEDGEVH
NT seq 2952 nt   +upstreamnt  +downstreamnt
atggccagtaatatgcagccttctgggccgcctcagcctcccaggcctcccatgatgggt
tctaacgctcagccacaaaatcttggaccaccaatgcctatgcagtttaggccagtggtt
ccttcgcaacagcctcctcagttcatgccaccaccagcgcagcagtttcggcctgttggt
cagcctatgccgggagctaacattggcatgccagggcaaatgccacattttccacaacct
ggacagcatttgtctcattcaagtcaggttccacctgcatcacaaggggttcctatggca
tatcagccagctagaccaatgtcatcagcacctatgcagccgcagcaacaagctgtgtat
cctgggggccatatgcctaccatgggcgcccctatgcagcccccatcctatacttatcaa
ccaacttcgattcctcctgtagtgcaaccctggggacagagtgtgcctcatgtgactcct
ctagtgcagcctggacaccagccggtgccagcaacagctactttgccttcagtcaactcg
tctgaacctagctcttcagattggcaagaacacactgcggctgaggggaagaagtactac
tataataagaagactaggcaatcaagttgggagaaacctgtcgaattgatgacacctttg
gagagggctgacgcctcaaccgaatggaaagaatttactactccagaaggacgaaagtac
tatttcaacaaagtaacaaagcaatcaaaatggactattcctgatgagttaaaggctgca
cgtgaattggcagagaaggcatcaaatcaacaatcggatcgagaaacaggaacagctgca
gctcttgttggatctgctgcctctgaaccttctactgtacctgctaatcagtcttcaact
gcagttggtttaattgctcccagcgcgcatgatgcatcagcaaaccctgttcctcctggt
cctgtcccatcacataatgtggacaacacttccagttcttctactattggcatgcaaaat
ggtggtacaagtactgctgttgttcctgttccaacaagcacagaagttaaattagttgca
accgatgcagggaccagcagaaacaataatgaaagttcatctgtaacaactggtgcggac
atagaagatggtacatctgctgaagatttggaggaggccaaaaagaccatgccagttgca
gggaagattaatgtcactccactggaggagaaaacaagtgaagaagaacctgtagtctat
gccactaagacggaggcaaaaaatgcattcaagtccctgctcgagtcagtaaatgttgag
tctgattggacatgggagcagactatgagagtcatcataaatgacaaaagatatggagct
ttgaaaactcttggagagagaaagcaagctttcaatgagtacttgaaccagcgaaaaaag
tttgaagctgaagaaaaacgtatcaaacagaggaaagcacgtgatgatttccttgcaatg
ctggaagagtgcaaggagcttacgtcatcaacaagatggagcaaagcaattcttatgttt
gaagatgatgaaaggttcaaagctgttgaacgtccaagggagcgtgaagatttatttgag
ggctatcttgtggaactacataagaaggaaaaagccaaggctatcgaagaacacagaagg
catgtagcagaatacaaagcttttctagaatcatgcgacttcatcaaggcaactactcag
tggagaaaagttcaagaacggctggaagatgatgaacgctgttctcgacttgaaaagatc
gatcgcttgaatgtttttcaagactacatacggtatctggagaaagaggaggaagagcag
aagcggatacaaaaggaacacgtaagaaggcaagagagaaaaaaccgtgatggatttcgt
aaaatgctggaagaacatgtcaatgatggcacacttactgcaaaaactcggtggcgtgat
tactgctcacagataaaggagtcacaggcttacctggcagtggcgtcaaacacgtctggc
tccacgccaaaagagctatttgatgatgtgatcgaggaacttgataaacagtatctagat
gacaagacctgcatcaaagaagtggtgaagtctggaaagattccaatgacaacctcatgg
acattggaggaatttcaaactgcgattctggaggatgatgctcttaaaggaatatcaacc
atcaacatcaagcttatttatgatgatcagattgaaaggctcagggaaaaagagcaaaag
gatgctaagaagcgccagcgattgggtgaaaatttttcagatcttctgtactcaatcacg
gaaatatcagctgcttcaacgtgggatgattctaaacagctatttgaggacagccaagag
ttcagggccttggacagtgagacttacgctagagagctttttgaagagtgtgttgtccac
ctgaaggaaaggttaaaagagaaagaacgtttgagggaggaagaaaaggcaaaaagagag
aaagaccgtgaagagaaagagaagaagaaagagaaagaaaggaaggagaaagagcgcaaa
gaaaaagaccgggagaaggagagagagaaggaaaaagggaaggatcgatcaaggagagat
gaaactgatattgatggtgctgatgtggagaaccatggttcaaaagataagaaaagagat
aaacaaaagaaacataagagacgccaccatgacacagatgatgctagttctgaaagggat
gataaagatgatgctaagaaatctcggaggcataccagtgatcgcaagaaatctaggaag
catacacatgcttcagactcggatagtgaaaaccggcacaaacgacatagaaaggaccga
gatagttcccgaagaaatggtgcacatgagctggaagatggtgaacttggagaagacggc
gaggtccattag

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