KEGG   Setaria viridis (green foxtail): 117843566
Entry
117843566         CDS       T07951                                 
Name
(RefSeq) protein transport protein SEC31 homolog B isoform X1
  KO
K14005  protein transport protein SEC31
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117843566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:svs04131]
    117843566
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:svs02044]
    117843566
Membrane trafficking [BR:svs04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    117843566
Secretion system [BR:svs02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   117843566
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WD40_WDHD1_1st WD40 TPR_Sec16 Beta-prop_EIPR1 Beta-prop_EML WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_IFT140_1st TPR_GEMI5 Beta-prop_WDR35_TULP_N MIOS_WD40 EIF3I ANAPC4_WD40 Beta-prop_WDR19_1st SRA1 Prp18 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 117843566
NCBI-ProteinID: XP_034580099
LinkDB
Position
2:45862444..45871557
AA seq 1109 aa
MACIKSAQRAALTALAPDAPYLAAGTMSGAVDISFSASANIEIFRLDFQSDSPDLPLLAS
APSPDRFNRLSWSRPGAVEGDSYALGLLAGGLSDGSVAVWNPLSMISSEGKAEDAMVARL
EKHTGAVCGLEFSELTPNRLASGAEQGELCIWDLKNPVEPVVYPPLKQSVGSSAQAEISC
LSWNPKFQHILATTSTNGMTVVWDLRNQKPLTSFSDSIRRKSSVLQWNPDMSTQLIVASD
DDSSPSLRVWDVRKTISPVREFVGHSKGVIAMSWCPYDSSFLLTCSKDNRTICWDTVSGE
IISELPTSDNWNFDLHWYRKIPGVIAASSFDGKIGIYNLEFSGLYAAGDAGGAPACPRAP
APKWLKCPTGASFGFGGKLVAFHPAAPTQGAQASTSEVHVHNLVIEQSLVSRSTEFEAAI
QNGDKSSLRALCEKKSQESLSDEERETWGFLRVMFEDGDVARTKLLAHLGFEPPQAPTVD
STDELSQTLADTLNLDHGTATDNADAQFLVDNGDDFFNNPQPSEASLAEESISTNGEQIE
QEIPGDVVPSDPSIDKSIQHALVVGDYKGAVNQCLAANRMADALVIAHAGGSALWESTRN
QYLRKSISPYLKVVSAMVGNDLMSFVSTWPLSSWKETLALLCTFARKEEWNVLCDTLASR
LLSVGDTLAATLCYICAGNIDKAVEIWSRNLKSEDGGQTYVDLLQDLMEKTITLALATGH
KRFSASLSKLVENYAELLASQGLLKTAMEYLKLLGSDEHSHELAILRDRIALSTEENDAA
RSSLSDSTGASSPYVTNHSYITQDQPQNLHQQVQSYNLHSSTYSDGYHQQSNAAFAYNNP
YQPQPQSQMFVPPSAPISSQLPQGSAPVQAPPQTVKTFTPANPMGLKNAEQYHQPNTLGS
QLYMPAANQPYSTPPVPSLGPTASVPGTVPNQMFPHSAATNSTARFMPSTNQGFVQRPGL
SPAQPSSPTQAQAQAQAQAQAAPPAPPPTVQTADTSKVSGELRPVIATLTRLFDETSKAL
GGSQATQAKKREIEDNSRKIGALFAKLNSGDISPNVSSKLIQLCSALDSSDFATAMHLQV
ILTTSDWDECNFWLAALKRMIKTRQNFRM
NT seq 3330 nt   +upstreamnt  +downstreamnt
atggcgtgcatcaagagcgcgcagcgggcggcgctgacggcgctggcgccggacgcgccg
tacctcgccgccggcaccatgagcggcgccgtcgacatcagcttctccgcgtccgccaac
atcgagatcttccgcctcgacttccagtccgactccccggacctcccgctcctcgcctcc
gcgccttccccggaccgcttcaaccgcctctcctggtcgcgcccgggcgcggtggagggt
gactcctacgcgctgggcctcctcgccggaggcctcagcgacggctccgtcgccgtgtgg
aacccgctgagcatgatcagctccgaggggaaagcggaggatgctatggtcgcgcggctg
gagaagcacaccggggcggtttgtggattggagtttagcgagctcacgccgaatcggctc
gcttcaggggctgagcagggggagctttgcatctgggatctcaagaacccagtcgagcca
gtagtgtacccaccactcaagcagagtgttggttccagcgcccaagcagaaatctcttgt
ttatcctggaatcccaagtttcaacatatattagcaaccacatctactaatgggatgaca
gttgtttgggatttaaggaaccagaaaccactgactagcttttcagattctattagaagg
aaatcctctgttcttcaatggaacccagacatgtccacccaactgattgttgcatcagat
gacgatagctcaccctcactgagagtttgggatgtgaggaagaccatttcacctgtaaga
gaatttgttggccattcaaaaggcgtgattgctatgtcctggtgcccttacgacagttcg
ttcttgcttacatgttccaaagacaatagaacaatatgctgggatactgttagtggagag
attattagtgagctaccaaccagcgataattggaattttgaccttcactggtatcgaaaa
attccaggcgtcatagcagcatcctcgtttgatgggaaaattggtatatacaacctagag
ttctctggactttatgcagctggtgatgctggtggtgccccagcatgtccaagagctcca
gctccaaaatggttgaaatgccccactggtgcatcttttggctttggtggtaaacttgtt
gctttccatccagcagcacccacccaaggcgcacaagcgtctacttctgaggtgcatgta
cacaatttggtgattgagcaaagtttggtgagccggtcaactgaatttgaagctgctata
cagaatggtgacaagagttcgctgcgtgctctgtgtgaaaaaaaatcacaagaatcatta
tctgatgaggagagagaaacatggggcttcttaagggttatgtttgaggatggggatgtt
gcaaggacaaaattacttgctcatcttggctttgaaccgcctcaggcaccaactgtggat
tcaactgatgaactgagccaaacattggcggatacacttaatcttgatcatggcacagca
accgataatgcggatgctcaatttcttgtcgataacggggatgattttttcaataaccct
caaccttcagaggctagcttagctgaagaatcaatttctacaaatggtgaacagatagag
caggaaatacctggagatgttgtgccatctgatccatcaattgacaagagcattcaacat
gcattggttgttggagactacaaaggtgcagttaaccagtgccttgctgcaaatcgtatg
gctgatgctctggttattgcccatgctggtggttctgctctatgggaaagcacaagaaat
cagtatcttagaaagagtatctcgccctacttaaaggttgtttctgctatggtgggcaat
gatttaatgagtttcgtgagtacttggccactaagttcgtggaaagaaactcttgcgcta
ctgtgcacatttgcgcggaaagaggaatggaatgttttgtgtgacacacttgcatctaga
ctcctcagtgttggagatacactagctgcaactctctgttacatctgtgctggaaatatt
gacaaagctgtggaaatatggtctcgcaacttgaagtctgaagatggggggcagacttat
gttgatcttctccaggatttgatggaaaagaccattactctcgcccttgctacaggccac
aagagatttagcgcgtcactttctaagcttgttgagaactatgctgaactgttggccagt
caaggtcttcttaagactgcaatggagtatttgaaactgttgggatcagatgagcattca
catgagctggcaattttgagagatagaattgcactttctacagaagagaatgatgctgct
aggagttctttgtctgatagtactggcgccagttccccctatgtcacaaatcatagttat
atcacccaagaccagcctcagaatcttcaccagcaggtacaatcgtataatctgcatagt
agcacatattcagatggttaccatcaacaatctaatgcagcctttgcatacaacaaccca
tatcaacctcaaccacaatctcaaatgtttgttccaccaagtgcaccgatcagctctcag
ctaccacaaggttctgctcctgtacaggcaccaccgcaaacagtaaagacatttactcct
gcaaacccaatgggtctgaaaaacgcagaacaatatcaccaacctaataccttgggttcc
cagctttacatgcctgctgcaaaccagccatattctactccaccagtcccttctcttggt
cctactgcctctgtaccaggaacggtccctaaccagatgtttccccattctgctgcaact
aactcaacggccaggtttatgccatcaaccaatcaaggctttgttcagaggcctggcttg
agtcctgcgcagccctcaagtccaacacaggcacaggcacaggcacaagcacaggcacaa
gcagctcctcctgcacctcccccgactgtgcagacagctgatacatctaaggtgtctggt
gaattgaggcctgttattgcaacattgaccagattgtttgatgagacatccaaagccctt
gggggttcacaagctactcaggcaaaaaagcgtgaaatcgaagacaattccaggaaaata
ggggcattgttcgccaaactaaatagtggcgacatatctccaaatgtttcatcaaaactc
attcagctgtgcagtgcacttgatagtagtgattttgccacggcgatgcacctccaggta
atcttgacaacaagtgactgggatgagtgcaacttttggcttgcggcattgaagcgtatg
atcaagacacggcagaacttcagaatgtaa

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