Setaria viridis (green foxtail): 117843604
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Entry
117843604 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117843604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117843604
Spliceosome [BR:
svs03041
]
Common components
Common spliceosomal components
SR proteins
117843604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RRM_Nup35
YflT
Motif
Other DBs
NCBI-GeneID:
117843604
NCBI-ProteinID:
XP_034580144
LinkDB
All DBs
Position
2:44620470..44624082
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AA seq
251 aa
AA seq
DB search
MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEVVDIYIPRDRRTGDSRGFA
FVRYKYEDEAQKAVDRLDGKLVDGREIMVQFAKYGPNAERINKGRIVEPVPRSRGRSRSR
SPRRRYRDDYRDDYRDRDYRRRSRSRSRDRYTRDRYRERDYRRRSRSRSYSPDDYKKHGR
DSLSPARRSPSRSRSRSYSPDDYKRRGRDSSASPASRSPSRSPPRKASPSPEKSPVRRND
DRSPRSRSPST
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcttcgggcgatccggcccgccgccaatccgcgacacctactccctcctcgtc
ctcaacatcaccttccgaacgacggccgatgacctcttccccctcttcgacaagtacggc
gaggtcgtcgacatctacatccccagggaccgcaggactggtgactcccgaggattcgcg
ttcgtgaggtacaagtacgaggacgaggcgcagaaggcagttgataggctcgatgggaaa
ctggtagatgggagggagatcatggtgcagtttgccaagtatggcccaaatgctgaacgg
attaacaaaggaagaatagtcgagccagttccaaggtcaaggggccgttccagaagccgc
agtccaagacggaggtaccgtgatgattatcgagatgactatcgggatagagattataga
aggcgaagtcggagtcggagtagagataggtacacacgtgacagatacagagagagggac
tatcgtcgtcgtagcaggagccgcagctacagccctgatgattacaaaaagcatgggaga
gacagtttgtctcctgcacgtagaagccctagtcgtagccgaagtcgcagctatagtcct
gatgattacaagaggcgtggcagagacagcagtgcgtcacctgcaagtaggagccctagc
cgctcccctcctcgcaaggcatcaccttctcctgagaaatctcctgtcaggcgcaatgat
gaccggtctcctcgttctcggagcccttcgacatga
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