KEGG   Setaria viridis (green foxtail): 117843672
Entry
117843672         CDS       T07951                                 
Name
(RefSeq) uncharacterized protein
  KO
K11338  RuvB-like protein 2 [EC:5.6.2.3]
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117843672
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:svs03036]
    117843672
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:svs03037]
    117843672
Enzymes [BR:svs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     117843672
Chromosome and associated proteins [BR:svs03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     117843672
  Chromatin remodeling factors
   SRCAP complex
    117843672
   INO80 complex
    117843672
   INO80 complex (yeast)
    117843672
   SWR1 complex
    117843672
   ASTRA complex
    117843672
Cilium and associated proteins [BR:svs03037]
 Motile cilia and associated proteins
  Dynein assembly factors
   117843672
SSDB
Motif
Pfam: TIP49 TIP49_C AAA RuvB_N AAA_22 AAA_16 AAA_19 DnaB_C AAA_5 Sigma54_activat ATPase CBFD_NFYB_HMF PIF1 Mg_chelatase nSTAND3 NACHT AAA_25 TsaE Zeta_toxin SLFN-g3_helicase bpMoxR GvpD_P-loop AAA_18 AAA_7 NPHP3_N Cdc6_lid AAA_11
Other DBs
NCBI-GeneID: 117843672
NCBI-ProteinID: XP_034580228
LinkDB
Position
2:42859411..42862814
AA seq 478 aa
MAELKRLSESRDLTRIERIGAHSHIRGLGLDSSMEARDASEGMVGQLPARRAAGLILQLI
RQGKIAGRAVLIAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAF
RRSIGVRIKEEAEIIEGEVVEISIDRPLSASSAGGSSSAPSGATAAGKSGRLTLKTTDME
TVYELGGKMIEALGKEKVQSGDVIALDKASGKVTKLGRSIGRSRDYDAVGPHTKFVKCPD
GELQKRKEVVHCVTLHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDTKVAEWREEGKA
EIVPGVLFIDEVHMLDIECFSFLNRALENDMAPILVIATNRGITSIRGTNYRSPHGIPPD
FLDRLLIITTQPYTEDEIRKILDIRCDEEDVEMSADAKVLLTKIGVETSLRYAIHLINSA
ALACQKRKGKVVEMEDISRVYQLFLDVKRSTQYLMEYQSQYMFNEVSGEADGNDAMQS
NT seq 1437 nt   +upstreamnt  +downstreamnt
atggcggagctgaagcggctgtcggagagccgcgacctgacgcgtatcgagcgaatcggc
gcgcactcccacatccgggggctagggctggactcctccatggaggcgcgcgacgcctcg
gagggcatggtcgggcagctcccggcccgccgcgccgcgggcctcatcctccagctcatc
cgccaggggaagatcgctggccgcgccgtgctcatcgcgggccagcccggcaccggcaag
acggcgcttgccatgggcatcgccaagtcgctcggcgcggagacgccattcgcctccgtc
gccgcctcggagctcttctccctcgacctatccaagacggaggcgctcacgcaggccttc
cgccgctccattggcgtccgcatcaaggaggaggcggagataattgagggcgaggttgtg
gagatctctatcgaccgccccttatctgcctccagcgctggcggcagctcctccgcgcct
tctggtgctactgcggctggtaaatccgggaggcttacgctgaagaccacggacatggag
acggtgtatgagctcggggggaagatgattgaggctcttgggaaggagaaggtgcagagt
ggggatgtgattgcgcttgacaaggcctctgggaaggtcactaagcttgggcgttccatt
gggaggtcgcgggattatgatgctgttggcccacacaccaagtttgtcaagtgccctgat
ggtgagctccagaagcgcaaggaggtcgtgcattgtgtcaccttacatgagatcgatgtc
atcaatagcaggacacagggttttcttgcactgttcactggtgacactggtgaaattcgt
gctgaggttcgggagcagattgacacaaaagttgcagagtggagagaggaaggaaaggct
gagattgtgcctggcgttctgtttatcgatgaagtccacatgctagatatcgagtgcttc
tccttcctcaaccgcgcattggaaaatgatatggctccgatcctagtcatcgcaacaaat
cgagggatcacatctatccgcgggacaaactaccggtcgccgcatgggatcccaccagat
ttcctcgaccggctcctgatcatcacgacgcagccctacacggaggacgagatccggaag
atcctggacatccggtgcgacgaggaggacgtggagatgtctgcagacgccaaggtcctg
ctcaccaagatcggtgtggagacctccctgaggtacgcaatccacctgatcaattccgcc
gcgctggcctgccagaagcgcaaaggtaaggtggtggagatggaggacattagccgggtg
taccagctgttcctggacgtgaagcggtcgacgcagtacctgatggagtaccagagccag
tacatgttcaatgaagtgtcgggggaagcagatggaaacgatgcgatgcagtcttag

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