Setaria viridis (green foxtail): 117843674
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Entry
117843674 CDS
T07951
Name
(RefSeq) probable acyl-CoA dehydrogenase IBR3
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00071
Fatty acid degradation
svs00280
Valine, leucine and isoleucine degradation
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01212
Fatty acid metabolism
Module
svs_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
svs_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
117843674
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
117843674
Enzymes [BR:
svs01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
117843674
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Gene cluster
GFIT
Motif
Pfam:
APH
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA_dh_N
Choline_kinase
PELOTA_1
EcKL
Motif
Other DBs
NCBI-GeneID:
117843674
NCBI-ProteinID:
XP_034580231
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All DBs
Position
2:46740147..46747423
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AA seq
834 aa
AA seq
DB search
MAKLTSELLRPVDPAHALDEAALLRYAAANVPGFPGPAPALALTQFGHGQSNPTYCIQAT
APGGGRTTRYVLRKKPPGAILQSAHAVEREYQVLKALGAHTDVPVPKVYCLCTDASVIGT
PFYIMEYLEGIIYPDNALPGVTPSKRRAIYLSTAKTLAAIHKVDVNAIGLQKYGRRDNYC
KRQVERWEKQYLASTGEGKPARYQRMLNLACWLKEHVPQEDSSAGSGTGLVHGDYRADNL
VFHPTEDRVIGVIDWELSTLGNQMCDVAYSCLPYIIDATPGERTSYGGFQHTGIPDGVPQ
LEEYLSVYCSFSARTWPAANWKFYVAFSLFRGASIYAGVYHRWTMGNASGGERAKFAGRI
ANTMVDCAWDFINRKNVLQEQPSRGFQVSEAPWQEFGREQEGSTSTKDQGKFVPSEKVMQ
LRKKLMKFIEDHIYPMEGEFYKHAQSTSRWTIHPEEENLKALAKKEGLWNLFIPLDSAAR
ARKLLFEDHSLVSPGSSNDLLLGVGLTNLEYGYLCEIMGRSVWAPQIFNCGAPDTGNMEV
LLRYGTKEQQKQWLVPLLEGKIRSGFAMTEPQVASSDATNIECSISRQGDFYVINGRKWW
TSGAMDPRCKILILMGKTDFSAPKHKQQSMILVDIDTPGVHVKRPLLVFGFDDAPHGHAE
ITFENVRVPVTNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMDLMVERALNRTAF
GKRIAQHGSFLSDLAKCRIDLEQARLLVLEAADQLDRHGNKEARGILAMAKVAAPNMALK
VLDMAMQVHGAAGLSSDTVLSHLWATARTLRIADGPDEVHLGTIAKLELQRARL
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagctgacctccgagctgctgcggccggtggacccggcgcacgcgctcgacgag
gccgcgctgctgcgctacgcggccgccaacgtcccggggttcccgggccccgcgccggcg
ctggcgctcacccagttcggccacggccagtccaaccccacctactgcatccaggccacc
gcgcccggggggggccggaccacccgctacgtgctgcggaagaagccgcccggggccatc
ctccagtccgcccacgccgtcgagcgcgagtaccaggttctcaaagctcttggtgctcac
acagatgtccctgtcccaaaggtttattgcctttgcacagatgcaagtgtaattggaact
cctttctacataatggagtatctggaaggaataatatatcctgataacgcgttgccgggg
gtaactccatctaaaaggcgggctatatatttatctactgccaaaactttggctgctata
cacaaagttgacgttaatgccattggattgcaaaagtatgggagaagagataactattgc
aaaagacaagtagaaagatgggagaagcaatatcttgcatccactggtgaagggaagcct
gcacgttatcagaggatgctcaacctagcttgttggttgaaagaacatgtaccacaagaa
gattcgtcagcaggatctggaacaggtcttgttcatggtgattaccgtgctgacaatcta
gtttttcacccaacagaggatcgagtaattggtgttattgattgggaactatctaccttg
gggaatcagatgtgtgatgttgcttatagttgcttgccatatattattgatgcaacaccc
ggtgaaaggacttcttatggagggttccaacatactggcattccagatggggttcctcaa
ctggaagagtacctttccgtatactgctctttctctgcaagaacctggcctgctgcaaat
tggaaattctacgttgctttttctctgtttcgtggggcatctatctatgctggagtgtat
cacagatggactatgggtaatgcttcgggtggtgagcgtgctaaatttgctggcaggatt
gctaacactatggttgactgtgcctgggacttcataaatagaaaaaatgtgttgcaagaa
cagccttctagaggttttcaagtctcagaagctccatggcaagaatttggcagagagcag
gaaggttcaacttctacaaaggatcaaggcaaatttgttcctagcgaaaaggttatgcag
cttcgaaagaaattgatgaagtttattgaagatcacatatacccaatggagggtgagttc
tacaaacatgcacaatcaacctcaagatggacaattcatccagaagaagaaaatcttaaa
gcattggcaaagaaggagggcctatggaacttgtttattccgctagacagtgcagctaga
gctagaaagctactatttgaggaccactctctcgtttcccctggaagttcaaatgacctt
ctgctgggtgtgggtctcactaatcttgagtatgggtatctgtgtgagattatgggacgt
tcagtttgggctcctcaaatatttaactgtggtgcacctgatacaggtaacatggaggtc
ctgttgaggtacggcaccaaggagcaacagaagcaatggttggttcctctattggaaggg
aaaattcgttctggatttgcgatgacagaaccacaagttgcatcttcagatgcaactaat
atagaatgctcaatatcgaggcagggagatttctacgtgataaatggaaggaaatggtgg
accagtggggctatggaccctagatgcaaaattctgattttaatggggaaaacagatttt
tctgcacctaagcataaacaacagtcaatgattttagtggacatcgacactcctggggtg
cacgtaaagagaccgttgttagtgttcggttttgatgacgcacctcatggacacgcggag
attacttttgagaatgtgcgtgtcccagtaacaaatatcctgcttggggaaggacggggt
tttgagattgctcaaggaaggctcggtcctggaagactacatcattgcatgaggctaata
ggggcagcagaacgtgggatggatctgatggtcgagagggccttaaataggactgcattt
ggaaagaggattgcccagcatggttcctttttatcagatcttgcgaagtgtcggattgat
ctggagcaggctagacttttggtcctagaagcagcggatcaactagaccgacatgggaac
aaggaagcccggggtatccttgcaatggccaaggtggcagctccaaatatggccctgaag
gtgcttgacatggcaatgcaagttcacggtgcggctggtctgtcatctgataccgtctta
tcccacctatgggcaaccgccaggacactgcggattgcagatggccctgatgaagtccat
ctggggacaattgcgaagctggagctgcaaagagcaaggttgtaa
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